Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
9
accessible chromatin
3
chromatin state
0
eQTL
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
1
bigBed bed9
1
bigWig
File set status
3
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
18
A549
13
common myeloid progenitor, CD34-positive
10
hematopoietic multipotent progenitor cell
9
CD4-positive, alpha-beta memory T cell
8
B cell
7
CD8-positive, alpha-beta memory T cell
7
adipose tissue
7
adrenal gland
7
heart left ventricle
7
macrophage
7
stomach
6
K562
6
T cell
6
liver
6
lymphoblastoid cell line
6
mononuclear cell
6
spleen
6
tibial nerve
5
MCF-7
5
body of pancreas
5
caudate nucleus
5
coronary artery
5
left cardiac atrium
5
regulatory T cell
5
sigmoid colon
5
substantia nigra
5
thyroid gland
5
tibial artery
5
transverse colon
4
CD14-positive monocyte
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
angular gyrus
4
aorta
4
ascending aorta
4
brain
4
cerebellum
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
frontal cortex
4
gastrocnemius medialis
4
heart right ventricle
4
layer of hippocampus
4
natural killer cell
4
ovary
4
psoas muscle
4
putamen
4
right atrium auricular region
4
small intestine
4
temporal lobe
3
HeLa-S3
3
Peyer's patch
3
blood cell
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of dermis
3
fibroblast of lung
3
heart
3
immortal human breast epithelial cell line cell
3
islet of Langerhans
3
kidney
3
lung
3
mammary gland epithelial cell
3
monocyte
3
naive T cell
3
neutrophil
3
omental fat pad
3
pancreas
3
prostate gland
3
right cardiac atrium
3
skeletal muscle tissue
3
skin of body
3
testis
3
thoracic aorta
3
upper lobe of left lung
3
vagina
2
22Rv1
2
Ammon's horn
2
Brodmann (1909) area 46
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipocyte
2
amygdala
2
anterior cingulate cortex
2
breast epithelium
2
bronchial epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
epithelial cell of prostate
2
esophagus squamous epithelium
2
fibroblast
2
fibroblast of breast
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
hypothalamus
2
iPSC derived cell line
2
keratinocyte
2
kidney tubule cell
2
lower leg skin
2
mesenchymal stem cell
2
mucosa of rectum
2
muscle
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
nucleus accumbens
2
parathyroid adenoma
2
right lobe of liver
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
uterus
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
1
BJ cell
1
C1 segment of cervical spinal cord
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELR
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H4
1
H54
1
HAP-1
1
HCT116
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HepG2
1
HuH-7
1
HuH-7.5
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
Leydig cell
1
LoVo cell
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
Organ
3
kidney
Life stage
embryonic
3
adult
Date released
2
September, 2022
1
May, 2019
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
relevant_life_stage!
embryonic
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR205PVO
released
Annotation file set
: Chromatin states for BSS01097 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR181LMN
released
Annotation file set
: Chromatin states for BSS01096 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR394RHU
released
Annotation file set
: ChromHMM 12-state model for adult kidney from ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP