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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
9
accessible chromatin
6
gene expression
2
histone modifications
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
6
Gene expression levels
1
Genetic variant effects
Annotation type Category
7
RNA-seq
Available data
6
tsv
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
1
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
24
islet of Langerhans
19
monocyte
16
epithelial cell of proximal tubule
14
glomerular endothelial cell
13
hepatocyte
11
cardiomyocytes
11
endothelial cell
11
subcutaneous adipose tissue
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
macrophage
9
progenitor cell of endocrine pancreas
9
regulatory T cell
8
EndoC_BH1
8
H1-hESC
8
T-helper 1 cell
8
T-helper 17 cell
8
liver
7
adipose tissue
7
kidney
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
6
kidney interstitial cell
6
lymphoblastoid cell line
6
pancreatic ductal cell
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
4
T-helper 2 cell
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cerebellum
4
endothelial cell of hepatic sinusoid
4
frontal cortex
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
omental fat pad
4
putamen
4
right atrium auricular region
4
substantia nigra
4
tibial nerve
3
CD8-positive, alpha-beta T cell
3
S-shaped body
3
T follicular helper cell
3
adult endothelial progenitor cell
3
amygdala
3
anterior cingulate cortex
3
blood cell
3
body of pancreas
3
brain
3
caudate nucleus
3
central memory CD8-positive, alpha-beta T cell
3
coronary artery
3
effector memory CD8-positive, alpha-beta T cell
3
heart
3
hepatocyte(AFP)
3
hypothalamus
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive B cel
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
natural killer cell
3
nucleus accumbens
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
skeletal muscle tissue
3
skin of body
3
smooth muscle cell
3
tibial artery
3
visceral abdominal adipose tissue
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
Ammon's horn
2
B Cell
2
B cell
2
C1 segment of cervical spinal cord
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling Mononuclear Phagocyte
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Kupffer cell
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Mast Cell
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
T Cell
2
T cell
2
Transitional Principal-Intercalated Cell
2
Vascular Smooth Muscle Cell / Pericyte
2
adipocyte
2
adrenal gland
2
ascending aorta
2
blood
2
cartilage tissue
2
cerebellum (Hemisphere)
2
dorsolateral prefrontal cortex
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
fibroblast
2
gastrocnemius medialis(Muscle - Skeletal)
2
heart left ventricle
2
iPSC derived cell line
2
kidney inner medulla collecting duct intercalated cell
2
left ventricle myocardium
2
leukocyte
2
lung
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
minor salivary gland
2
muscle
2
neutrophil
2
osteoblast
2
ovary
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
renal vesicle
2
retina
2
right lobe of liver
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell of the coronary artery
2
spleen
2
stomach
2
testis
2
type I muscle cell
2
type II muscle cell
2
uterus
2
vagina
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Leydig cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
alpha-beta T cell
Disease term
chronic kidney disease
1
chronic kidney disease, hypertensive disorder
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
hypertensive disorder
Organ
7
kidney
Date released
6
February, 2021
1
August, 2021
Software used
6
r
1
matrix-eQTL
Lab
7
Katalin Susztak, Upenn
Project
7
AMP
RFA
7
AMP2
disease_term_name!
chronic kidney disease
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR383IER
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR992NTS
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR576EDR
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR860SBJ
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR103OWX
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR464URP
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP