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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
35
candidate regulatory elements
20
chromatin state
17
target gene predictions
13
accessible chromatin
9
gene expression
3
Fine-mapped variants
3
eQTL
3
variant allelic effects
2
histone modifications
1
binding sites
Annotation Category
6
Genetic variant effects
Annotation type Category
6
RNA-seq
Available data
4
tsv
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
15
islet of Langerhans
9
subcutaneous adipose tissue
7
liver
7
macrophage
6
lymphoblastoid cell line
6
putamen
6
substantia nigra
5
amygdala
5
anterior cingulate cortex
5
caudate nucleus
5
cerebellum
5
coronary artery
5
frontal cortex
5
hypothalamus
5
nucleus accumbens
5
omental fat pad
5
right atrium auricular region
5
tibial artery
5
tibial nerve
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
adipose tissue
4
ascending aorta
4
body of pancreas
4
cerebellum (Hemisphere)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
monocyte
4
right lobe of liver
3
blood cell
3
skin of body
2
T cell
2
articular chondrocyte
blood
2
brain
2
cartilage tissue
2
fibroblast
2
iPSC derived cell line
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
regulatory T cell
2
skeletal muscle tissue
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adrenal gland
1
breast
1
cerebellar hemisphere
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
endothelial cell
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
heart left ventricle
1
helper T cell
1
kidney
1
layer of hippocampus
1
lung
1
mesenchymal stem cell
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
nephron tubule
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
progenitor cell
1
prostate gland
1
renal glomerulus
1
retina
1
sensory neuron
1
small intestine
1
smooth muscle cell
1
spinal cord
1
spleen
1
stomach
1
synovial joint
1
testis
1
thyroid gland
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
5
limb
5
nerve
1
kidney
Life stage
4
adult
Date released
3
March, 2020
1
August, 2021
1
February, 2020
1
January, 2022
Software used
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
matrix-eQTL
1
qTLtools
Lab
5
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
6
AMP
RFA
5
AMP
1
AMP2
biosample_term_name!
blood
Showing 6 of 6 results
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Download
FileSet
DSR231HNL
released
Annotation file set
: nerve tibial eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR620PQQ
released
Annotation file set
: Fine-mapping results from DAPG of tibial nerve for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR923XXP
released
Annotation file set
: Fine-mapping results from CAVIAR of tibial nerve for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR307ROF
released
Annotation file set
: Fine-mapping results from CaVEMaN of tibial nerve for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR158IZH
released
Annotation file set
: eQTL of tibial nerve for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP