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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
42
candidate regulatory elements
25
chromatin state
24
target gene predictions
14
accessible chromatin
8
gene expression
7
eQTL
4
histone modifications
2
binding sites
1
caQTL
1
differential activity
1
variant allelic effects
Annotation Category
7
Genetic variant effects
Annotation type Category
4
RNA-seq
3
RNA microarray
2
Expression arrays
Available data
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
6
hg19
1
hg18
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
10
islet of Langerhans
6
liver
5
subcutaneous adipose tissue
3
adipose tissue
2
articular chondrocyte
2
blood
2
cartilage tissue
2
omental fat pad
2
skeletal muscle tissue
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
body of pancreas
1
caudate nucleus
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
hypothalamus
1
kidney
1
left ventricle myocardium
1
mesenchymal stem cell
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron tubule
1
neutrophil
1
nucleus accumbens
1
progenitor cell
1
putamen
1
renal glomerulus
1
retina
1
right atrium auricular region
1
right lobe of liver
1
smooth muscle cell
1
substantia nigra
1
synovial joint
1
tibial artery
1
tibial nerve
1
type I muscle cell
1
type II muscle cell
Organ
6
liver
1
kidney
Life stage
3
adult
Date released
7
August, 2021
January, 2022
Software used
1
bimbam
1
emmax
1
haploview
1
mach2qtl
1
matrix-eQTL
1
r
1
snap
1
unknown
Lab
6
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
7
AMP
RFA
6
AMP
1
AMP2
biosample_term_name!
cortex
month_released!
January, 2022
Showing 7 of 7 results
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Download
FileSet
DSR297BCT
released
Annotation file set
: eQTL annotation of liver from PMID:28838971
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR109YEK
released
Annotation file set
: eQTL annotation of liver from PMID:28666119
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR372LXQ
released
Annotation file set
: eQTL annotation of human liver from PMID:21637794(NCBI GEO accession: :GSE25935, GSE26105)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR970CNB
released
Annotation file set
: eQTL annotation of human liver from PMID:22006096(NCBI GEO accession: GSE32504, GSE39036)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR387ONQ
released
Annotation file set
: eQTL annotation of human liver from PMID:18462017(NCBI GEO accession: GSE9588)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR606JYM
released
Annotation file set
: eQTLS in different tissues: liver (960 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP