Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
40
candidate regulatory elements
24
chromatin state
21
target gene predictions
13
accessible chromatin
8
gene expression
3
histone modifications
3
variant allelic effects
2
eQTL
1
binding sites
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
15
islet of Langerhans
9
breast cancer cell
8
liver
8
lymphoblastoid cell line
8
macrophage
7
melanoma
6
endothelial cell of hepatic sinusoid
6
fibroblast cell line
6
subcutaneous adipose tissue
5
adipose tissue
5
monocyte
5
prostate cancer cell line
4
fibroblast
4
foreskin fibroblast
4
glioblastoma multiforme cancer stem cell
4
keratinocyte
4
mammary epithelial cell
4
neural progenitor cell
4
neuroblastoma cell
3
HepG2
3
MCF-7
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
blood cell
3
brain
3
cardiac muscle cell
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
embryonic stem cell
3
endothelial cell
3
iPSC derived cell line
3
liposarcoma
3
neuronal stem cell
3
osteoblast
3
prostate gland
3
putamen
3
regulatory T cell
3
skin of body
3
spinal cord
3
substantia nigra
3
synovial sarcoma cell
3
triple-negative breast cancer
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
H1-hESC
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HEK293-T-REx cell
2
HL-60
2
HS-SY-2 cell
2
IMR-90
2
Jurkat
2
K562
2
Mantle cell lymphoma
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUM-185PE cell
2
T cell
2
T-47D cell
2
T-lymphocyte
2
Th1 cell
2
U-87 MG
2
U2OS
2
WERI-Rb-1
2
WI-38 cell
2
adult acute myeloid leukemia
2
amygdala
2
anterior cingulate cortex
2
aortic adventitial fibroblast
2
articular chondrocyte
2
blood
2
bronchial epithelial cell
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
colon adenocarcinoma
2
coronary artery
2
cortex of kidney
2
diffuse large B-cell lymphoma
2
endothelial cell of umbilical vein
2
erythroblast
2
erythroid progenitor cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
frontal cortex
2
gastric cancer cell
2
glioblastoma cell
2
hypothalamus
2
immortal neural cell line cell
2
kidney
2
layer of hippocampus
2
leukemic stem cell
2
lung fibroblast cell line
2
mammary gland epithelial cell
2
mesenchymal stem cell
2
metastatic melanoma
2
mononuclear cell of bone marrow
2
muscle
2
myotube
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neuroblastoma cell line
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
osteosarcoma
2
pancreas
2
pancreatic cancer cell
2
pancreatic cell line
2
pancreatic ductal cell
2
peripheral blood-derived erythroblast
2
placenta
2
primordial germ cell
2
prostate derived cell line
2
renal epithelial cell
2
retina
2
retinal pigment epithelial cell
2
right atrium auricular region
2
skeletal muscle myoblast
2
skeletal muscle tissue
2
spleen
2
testis
2
tibial artery
2
tibial nerve
2
tracheal epithelial cell
1
143B
1
22Rv1
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A2780 cell
1
AGS cell
1
ALL-SIL cell
1
Adipose stromal cell
1
Ammon's horn
1
AsPC-1 cell
1
B-CPAP cell
1
B-cell acute lymphoblastic leukemia
1
B-cell lymphoma cell
Organ
2
kidney
1
heart
Date released
1
August, 2021
1
February, 2021
1
January, 2022
Software used
1
macs
1
matrix-eQTL
1
qTLtools
Lab
2
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
3
AMP
RFA
2
AMP
1
AMP2
biosample_term_name!
transverse colon
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR133XNL
released
Annotation file set
: heart left ventricle eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR715ILK
released
Annotation file set
: Binding sites annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP