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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
2
chromatin state
2
target gene predictions
0
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
40
stomach
39
heart
34
muscle of arm
33
lung
30
brain
29
small intestine
28
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
21
A549
20
thymus
19
hematopoietic multipotent progenitor cell
15
spleen
14
B cell
14
CD4-positive, alpha-beta memory T cell
14
spinal cord
13
heart left ventricle
13
liver
11
foreskin keratinocyte
10
sigmoid colon
9
MCF-7
9
body of pancreas
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
adipose tissue
8
cardiac muscle cell
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
thyroid gland
8
tibial nerve
8
transverse colon
7
CD8-positive, alpha-beta T cell
7
H9
7
K562
7
Peyer's patch
7
endocrine pancreas
7
endothelial cell of umbilical vein
7
foreskin fibroblast
7
heart right ventricle
7
mononuclear cell
7
neurosphere
7
psoas muscle
7
retina
7
testis
7
upper lobe of left lung
6
T cell
6
T-helper 1 cell
6
caudate nucleus
6
dermis blood vessel endothelial cell
6
esophagus squamous epithelium
6
fibroblast
6
fibroblast of lung
6
layer of hippocampus
6
lower leg skin
6
natural killer cell
6
pancreas
6
skeletal muscle tissue
5
HeLa-S3
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
adipocyte
5
ascending aorta
5
breast epithelium
5
coronary artery
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
hepatocyte
5
neural progenitor cell
5
omental fat pad
5
parathyroid adenoma
5
regulatory T cell
5
right atrium auricular region
5
skeletal muscle myoblast
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
5
thoracic aorta
5
tibial artery
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
4
T-cell
4
angular gyrus
4
aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
epithelial cell of esophagus
4
epithelial cell of prostate
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
keratinocyte
4
mammary gland epithelial cell
4
mesenchymal stem cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
prostate gland
4
smooth muscle cell
4
stomach smooth muscle
4
tongue
4
trophoblast
4
vagina
3
LNCaP clone FGC
3
MCF 10A
3
T47D
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
cardiac fibroblast
3
cerebellum
3
chorion membrane
3
choroid plexus epithelial cell
3
endometrium adenocarcinoma
3
enterocyte
3
fibroblast of cardiac tissue
3
frontal cortex
3
globus pallidus
3
immortal human breast epithelial cell line cell
3
left cardiac atrium
3
limb
3
lung microvascular endothelial cell
3
macrophage
3
mammary epithelial cell
3
middle frontal gyrus
3
myofibroblast cell
3
naive T cell
3
neural cell
3
putamen
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
subcutaneous adipose tissue
3
suprapubic skin
3
urinary bladder
3
uterus
2
cardiac fibroblast
2
muscle of leg
2
A172
2
A673
2
ACC112
2
AG10803
2
Ammon's horn
2
Brodmann (1909) area 46
2
C4-2B
2
CD1c-positive myeloid dendritic cell
2
CMK
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
IMR-90
2
KBM-7
2
KMS-11
Organ
kidney
4
intestine
4
large intestine
Life stage
4
adult
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
kidney
Showing 4 of 4 results
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Download
FileSet
DSR517BWR
released
Annotation file set
: Candidate regulatory elements for BSS01286 muscle layer of colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR063HGJ
released
Annotation file set
: Candidate regulatory elements for BSS01285 muscle layer of colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR023HHN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE muscle layer of colon
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR475BBT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE muscle layer of colon
Lab:
AMP-T2D consortium
Project:
AMP