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Schema
Citing CMDGA
Clear Filters
Annotation type
16
chromatin state
7
accessible chromatin
7
gene expression
2
histone modifications
1
binding sites
1
eQTL
0
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
14
islet of Langerhans
10
macrophage
8
fibroblast
7
liver
7
subcutaneous adipose tissue
6
lymphoblastoid cell line
5
adipose tissue
4
T cell
4
monocyte
3
blood cell
3
coronary artery
3
endothelial cell
3
enterocyte
3
myofibroblast cell
3
putamen
3
right atrium auricular region
3
skin of body
3
smooth muscle cell
3
substantia nigra
3
tibial artery
3
tibial nerve
2
MIN6
2
Schwann cell
2
amygdala
2
anterior cingulate cortex
2
basal cell
2
blood
2
brain
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
epithelial cell of esophagus
2
frontal cortex
2
goblet cell
2
heart left ventricle
2
hypothalamus
2
iPSC derived cell line
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
regulatory T cell
2
skeletal muscle fiber
2
skeletal muscle tissue
2
vascular associated smooth muscle cell
1
Adipose SGBS cell line (adipocyte)
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
EndoC_BH1
1
Heart fetal (cardiac muscle cell)
1
Leydig cell
1
Liver fetal (hepatocyte)
1
Pancreatic progenitors (progenitor cell of endocrine pancreas)
1
Preadipose SGBS cell line (adipocyte)
1
Satellite Cells, Skeletal Muscle
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
adrenal gland
1
ascending aorta
1
body of pancreas
1
breast
1
bronchial goblet cell
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
colon sigmoid
1
cortex
1
cortex of kidney
1
cortical cell of adrenal gland
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
gastrocnemius medialis(Muscle - Skeletal)
1
granulosa cell
1
helper T cell
1
hepatocyte
1
keratinocyte
1
kidney
1
layer of hippocampus
1
left ventricle myocardium
1
luminal epithelial cell of prostatic duct
1
lung
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesenchymal stem cell
1
mesothelial cell
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive t cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
nephron tubule
1
ovary
1
pancreas
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
pituitary gland
1
placenta
1
progenitor cell
1
prostate gland
1
purified protein and synthetic DNA oligo binding assay
1
renal glomerulus
1
retina
1
right lobe of liver
1
sensory neuron
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
synovial joint
1
testis
1
thoracic aorta
1
thyroid follicular cell
1
thyroid gland
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
type II pneumocyte
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
1
kidney
Date released
1
August, 2021
Software used
1
matrix-eQTL
Lab
1
Katalin Susztak, Upenn
Project
1
AMP
RFA
1
AMP2
annotation_type_category!
DNase-seq
Showing 1 of 1 results
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP