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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
31
candidate regulatory elements
18
chromatin state
16
target gene predictions
12
accessible chromatin
9
gene expression
3
Fine-mapped variants
3
eQTL
2
histone modifications
2
variant allelic effects
1
binding sites
Annotation Category
5
Genetic variant effects
Annotation type Category
3
RNA-seq
2
DNase-seq
Available data
3
tsv
2
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
6
fibroblast
5
coronary artery
5
right atrium auricular region
5
tibial artery
5
tibial nerve
4
ascending aorta
4
body of pancreas
4
caudate nucleus
4
cerebellum (Hemisphere)
4
frontal cortex
4
putamen
4
subcutaneous adipose tissue
3
Ammon's horn
3
C1 segment of cervical spinal cord
3
amygdala
3
anterior cingulate cortex
3
cerebellum
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
enterocyte
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
islet of Langerhans
3
left ventricle myocardium
3
macrophage
3
myofibroblast cell
3
nucleus accumbens
3
omental fat pad
3
right lobe of liver
3
substantia nigra
2
cardiac fibroblast
2
muscle of leg
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Schwann cell
2
T cell
2
basal cell
2
cardiac muscle cell
2
endothelial cell
2
epithelial cell of esophagus
2
goblet cell
2
heart
2
heart left ventricle
2
hepatocyte
2
skeletal muscle fiber
2
smooth muscle cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
EndoC_BH1
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
adipose tissue
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain
1
brain pericyte
1
bronchial goblet cell
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
choroid plexus epithelial cell
1
cortical cell of adrenal gland
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
heart right ventricle
1
hepatic stellate cell
1
keratinocyte
1
kidney
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
medulla oblongata
1
mesothelial cell
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
naive t cell
1
occipital lobe
1
pancreas
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
pons
1
purified protein and synthetic DNA oligo binding assay
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
skeletal muscle cell
1
skeletal muscle myoblast
1
smooth muscle cell of the brain vasculature
1
superior temporal gyrus
1
thoracic aorta
1
thyroid follicular cell
1
type II pneumocyte
Organ
4
brain
1
kidney
Life stage
3
adult
1
fetal
Date released
3
March, 2020
2
May, 2020
Software used
2
deltasvm
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR821RRV
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney fetal DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR698IHA
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain frontal cortex DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR813SYV
released
Annotation file set
: Fine-mapping results from DAPG of frontal cortex for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649QNM
released
Annotation file set
: Fine-mapping results from CAVIAR of frontal cortex for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR344RJC
released
Annotation file set
: Fine-mapping results from CaVEMaN of frontal cortex for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP