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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
10
accessible chromatin
7
gene expression
2
histone modifications
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
7
Gene expression levels
1
Genetic variant effects
Annotation type Category
7
RNA-seq
1
DNase-seq
Available data
7
tsv
1
bed bed3+
File set status
8
released
Genome assembly (visualization)
1
hg19
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
17
epithelial cell of proximal tubule
15
glomerular endothelial cell
8
kidney
7
kidney loop of Henle thin ascending limb epithelial cell
6
glomerular visceral epithelial cell
6
kidney interstitial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
Connecting Tubule Cell
3
Cortical Thick Ascending Limb Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Medullary Thick Ascending Limb Cell
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
renal cortical epithelial cell
1
left kidney
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
epithelial cell of distal tubule
1
kidney - cortex
1
kidney - medulla
1
kidney capillary endothelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
left renal cortex interstitium
1
left renal pelvis
1
metanephros
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal cortex interstitium
1
renal pelvis
1
renal principal cell
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
ureteric bud
Disease term
1
chronic kidney disease
1
chronic kidney disease, hypertensive disorder
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
hypertensive disorder
Organ
8
kidney
Life stage
1
fetal
Date released
7
February, 2021
1
May, 2020
Software used
7
r
1
deltasvm
Lab
7
Katalin Susztak, Upenn
1
AMP-T2D consortium
Project
8
AMP
RFA
7
AMP2
1
AMP
Showing 8 of 8 results
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Download
FileSet
DSR383IER
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR992NTS
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR576EDR
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR860SBJ
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR103OWX
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR464URP
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR514WID
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR821RRV
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney fetal DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP