Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
eQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
151
ChIP-seq
50
DNase-seq
23
ATAC-seq
2
RNA-seq
2
snATAC-seq
1
DNA methylation profiling by array assay
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
3
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
9
islet of Langerhans
7
subcutaneous adipose tissue
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
amygdala
4
anterior cingulate cortex
4
ascending aorta
4
body of pancreas
4
caudate nucleus
4
cerebellum
4
cerebellum (Hemisphere)
4
coronary artery
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
frontal cortex
4
gastrocnemius medialis(Muscle - Skeletal)
4
hypothalamus
4
left ventricle myocardium
4
nucleus accumbens
4
omental fat pad
4
putamen
4
right atrium auricular region
4
right lobe of liver
4
substantia nigra
4
tibial artery
4
tibial nerve
2
adipose tissue
2
blood
2
cartilage tissue
2
liver
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
skeletal muscle tissue
1
endothelial cell
1
kidney
1
mesenchymal stem cell
1
monocyte
1
nephron tubule
1
progenitor cell
1
renal glomerulus
1
smooth muscle cell
1
synovial joint
1
type I muscle cell
1
type II muscle cell
Organ
1
kidney
Life stage
1
adult
Date released
1
August, 2021
1
May, 2021
Software used
1
limix
1
matrix-eQTL
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
2
AMP
RFA
1
AMP
1
AMP2
biosample_term_name!
skeletal muscle fiber
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP