Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
caQTL
1
eQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
2
ATAC-seq
1
RNA-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
7
islet of Langerhans
2
CD4-positive helper T cell
1
kidney
1
nephron tubule
1
renal glomerulus
1
skeletal muscle tissue
1
subcutaneous adipose tissue
Organ
1
kidney
Date released
2
October, 2022
1
August, 2021
Software used
35
r
16
chromhmm
15
encode-ccres
15
macs
3
matrix-eQTL
2
abc
1
bedops
1
deltasvm
1
pepatac
Lab
2
Stephen S. Rich Lab @UVA
1
Katalin Susztak, Upenn
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP2
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP