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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
eQTL
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
11
CD4-positive, alpha-beta memory T cell
11
foreskin keratinocyte
7
common myeloid progenitor, CD34-positive
7
foreskin fibroblast
6
endothelial cell of umbilical vein
5
T-helper 17 cell
5
WI38
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
4
bronchial epithelial cell
4
epithelial cell of prostate
4
foreskin melanocyte
4
neutrophil
3
B cell
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta memory T cell
3
dermis blood vessel endothelial cell
3
fibroblast of lung
3
keratinocyte
3
lung microvascular endothelial cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
2
A673
2
CD14-positive monocyte
2
CD1c-positive myeloid dendritic cell
2
CMK
2
DND-41
2
Daoy
2
EH
2
EL
2
ELR
2
G401
2
GM06990
2
GM08714
2
GM12864
2
GM12865
2
HepG2
2
KOPT-K1
2
L1-S8
2
MG63
2
NAMALWA
2
NAMALWA cell
2
PC-9
2
Panc1
2
SJCRH30
2
SK-N-MC
2
T-cell
2
T-helper 1 cell
2
T-helper 2 cell
2
WERI-Rb-1
2
adipocyte
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
brain microvascular endothelial cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast of dermis
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
heart
2
heart left ventricle
2
heart right ventricle
2
hematopoietic multipotent progenitor cell
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 6.9
2
iris pigment epithelial cell
2
kidney epithelial cell
2
lung
2
mononuclear cell
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
psoas muscle
2
pulmonary artery endothelial cell
2
regulatory T cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
sigmoid colon
2
skeletal muscle cell
2
skeletal muscle myoblast
2
skeletal muscle tissue
2
small intestine
2
smooth muscle cell of the brain vasculature
2
spleen
2
stomach
2
stromal cell of bone marrow
2
thymus
1
BE(2)-C
1
BE2C
1
BJ
1
BJ cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta T cell
1
CWRU1
1
D721Med
1
GM03348
1
GM10248
1
GM10266
1
GM12801
1
GM12873
1
GM12874
1
GM12875
1
GM12891
1
GM12892
1
GM13976
1
GM13977
1
GM18507
1
GM20000
1
HCEC 1CT
1
HFF-Myc
1
HK-2
1
HK-2 cell
1
Jurkat, Clone E6-1
1
L1-S8R
1
NCI-H460
1
NCI-H460 cell
1
NT2-D1 cell
1
NT2/D1
1
RKO
1
T cell
1
amniotic epithelial cell
1
brain pericyte
1
cardiac fibroblast
1
chorion membrane
1
colon carcinoma
1
colon epithelial cell
1
effector memory CD4-positive, alpha-beta T cell
1
endocrine pancreas
1
epidermal melanocyte
1
epithelial cell of amnion
1
fibroblast of cardiac tissue
1
germinal center
1
hepatocyte
1
iPS DF 4.7
1
iPS DF 4.7 Cell Line
1
liver
1
lymphocyte
1
mammary epithelial cell
1
mammary gland epithelial cell
1
medulloblastoma
1
myotube
1
naive T cell
1
pericyte cell
1
regular cardiac myocyte
1
urothelium cell line
Organ
2
lung
Life stage
embryonic
adult
1
child
1
young adult
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
relevant_life_stage!
embryonic
adult
Showing 2 of 2 results
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Download
FileSet
DSR934KAC
released
Annotation file set
: Candidate regulatory elements for BSS01201 lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR300HLO
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung
Lab:
AMP-T2D consortium
Project:
AMP