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Citing CMDGA
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Annotation type
1
gene expression
1
target gene predictions
Annotation Category
cis-regulatory elements
1
Gene expression levels
1
Target gene links
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
18
A549
18
monocyte
16
epithelial cell of proximal tubule
14
subcutaneous adipose tissue
13
glomerular endothelial cell
13
hepatocyte
12
islet of Langerhans
11
adipose tissue
10
body of pancreas
10
common myeloid progenitor, CD34-positive
10
liver
10
tibial nerve
9
caudate nucleus
9
hematopoietic multipotent progenitor cell
9
omental fat pad
8
right atrium auricular region
7
adrenal gland
7
ascending aorta
7
cerebellum
7
coronary artery
7
endothelial cell
7
frontal cortex
7
kidney loop of Henle thin ascending limb epithelial cell
7
putamen
7
regulatory T cell
7
substantia nigra
7
tibial artery
6
Ammon's horn
6
B cell
6
K562
6
T-helper 1 cell
6
right lobe of liver
6
stomach
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD8-positive, alpha-beta memory T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
MCF-7
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
amygdala
5
anterior cingulate cortex
5
cerebellum (Hemisphere)
5
gastrocnemius medialis(Muscle - Skeletal)
5
heart left ventricle
5
hypothalamus
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mononuclear cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
natural killer cell
5
neutrophil
5
nucleus accumbens
5
spleen
4
T-helper 17 cell
4
bone tissue
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell of hepatic sinusoid
4
gastrocnemius medialis
4
glomerular visceral epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
ovary
4
pancreas
4
psoas muscle
4
sigmoid colon
4
thyroid gland
4
transverse colon
3
CD14-positive monocyte
3
CD4-positive, alpha-beta memory T cell
3
Cycling Mononuclear Phagocyte
3
HeLa-S3
3
Mast Cell
3
Peyer's patch
3
T cell
3
adult endothelial progenitor cell
3
aorta
3
endocrine pancreas
3
endometrium adenocarcinoma
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney interstitial cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
layer of hippocampus
3
mesangial cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
skeletal muscle tissue
3
testis
3
upper lobe of left lung
3
vagina
3
visceral abdominal adipose tissue
2
Brodmann (1909) area 46
2
Kupffer cell
2
LNCaP clone FGC
2
T-helper 2 cell
2
T47D
2
adipocyte
2
angular gyrus
2
articular chondrocyte
2
blood
2
breast epithelium
2
cardiomyocytes (cardiac muscle cell)
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
fibroblast of breast
2
gamma-delta T cell
2
globus pallidus
2
heart
2
heart right ventricle
2
kidney
2
kidney inner medulla collecting duct intercalated cell
2
lower leg skin
2
lung
2
lymphocyte of B lineage (iPSC)
2
macrophage
2
mammary gland epithelial cell
2
medulla oblongata
2
midbrain
2
middle frontal gyrus
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive T cell
2
pancreatic polypeptide-secreting cell
2
parathyroid adenoma
2
pons
2
prostate gland
2
retina
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
small intestine
2
smooth muscle cell of the coronary artery
Organ
2
lung
Life stage
30
embryonic
2
adult
1
child
1
fetal
Date released
1
March, 2024
1
September, 2022
Software used
2
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_category!
cis-regulatory elements
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR315SRJ
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Lung.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR696RKA
released
Annotation file set
: Target gene predictions for BSS01190 lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP