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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
eQTL
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Genetic variant effects
1
Target gene links
1
cis-regulatory elements
Annotation type Category
ChIP-seq
58
DNase-seq
2
RNA-seq
1
pCHi-C
Available data
2
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
51
HeLa-S3
46
H1-hESC
39
monocyte
38
islet of Langerhans
26
retina
20
pigmented layer of retina
19
EndoC_BH1
19
HFFc6
18
neural progenitor cell
17
K562
17
epithelial cell of proximal tubule
16
glomerular endothelial cell
16
subcutaneous adipose tissue
14
liver
13
regulatory T cell
12
coronary artery
12
right atrium auricular region
12
tibial nerve
11
T-helper 1 cell
11
adipose tissue
11
cardiomyocytes
11
heart
11
hepatocyte
11
macrophage
11
tibial artery
10
frontal cortex
10
putamen
9
T-helper 17 cell
9
caudate nucleus
9
extended pluripotent stem (EPS) cells
9
heart left ventricle
9
induced pluripotent stem cell
9
omental fat pad
9
pancreas
9
progenitor cell of endocrine pancreas
8
Ammon's horn
8
cardiomyocytes (cardiac muscle cell)
8
cerebellum
8
endothelial cell
8
glomerular visceral epithelial cell
8
retinal pigment epithelial cell
7
B cell
7
GM12878
7
ascending aorta
7
body of pancreas
7
embryonic stem cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphoblastoid cell line
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
osteoblast
7
pancreatic ductal cell
7
substantia nigra
6
CD8-positive, alpha-beta T cell
6
H9
6
SGBS preadipocytes
6
T-helper 2 cell
6
amygdala
6
anterior cingulate cortex
6
brain
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
gamma-delta T cell
6
hypothalamus
6
iPSC derived cell line
6
kidney interstitial cell
6
lymphocyte
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
nucleus accumbens
6
olfactory receptor cell
5
cardiac fibroblast
5
C1 segment of cervical spinal cord
5
HUES8
5
T follicular helper cell
5
adipocyte
5
central memory CD8-positive, alpha-beta T cell
5
chondrocyte
5
effector memory CD8-positive, alpha-beta T cell
5
gastrocnemius medialis(Muscle - Skeletal)
5
heart right ventricle
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
memory B cell
5
mesangial cell
5
neutrophil
5
pancreatic beta cell
5
right lobe of liver
5
spleen
5
stomach
4
CyT49
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
adrenal gland
4
adult endothelial progenitor cell
4
bone tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
endothelial cell of umbilical vein
4
glutamatergic neuron
4
hepatic stellate cell
4
kidney
4
kidney glomerular epithelial cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
naive B cell
4
natural killer cell
4
nephron progenitor
4
occipital lobe
4
ovary
4
pancreatic alpha cell
4
psoas muscle
4
renal cortical epithelial cell
4
skeletal muscle myoblast
4
smooth muscle cell of the coronary artery
4
visceral abdominal adipose tissue
3
HepG2
3
S-shaped body
3
T cell
3
aorta
3
blood cell
3
brain pericyte
3
cardiac muscle cell
3
choroid plexus epithelial cell
3
dorsolateral prefrontal cortex
3
globus pallidus
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
left cardiac atrium
3
lung
3
medulla oblongata
3
mesenchymal stem cell
3
midbrain
3
naive B cel
3
naive regulatory T cell
3
pancreatic acinar cell
3
pancreatic delta cell
3
pons
3
renal pelvis
3
skeletal muscle tissue
3
skin of body
3
small intestine
3
spinal cord
3
superior temporal gyrus
3
testis
3
thymus
3
uterus
2
hindlimb muscle
2
muscle of leg
2
CD4-positive, alpha-beta T cell
2
GM18507
2
GM19240
2
HCT116
2
Kupffer cell
2
MIN6
2
Rh-4 cell
2
activated CD4-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
adipose-derived stem cell
2
aortic endothelial cell
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
blood
2
bone marrow cell
2
cortex of kidney
2
differentiating adipose-derived stem cell
2
erythroid cell
2
esophagus
2
esophagus muscularis mucosa
2
excitatory neuron
2
fibroblast
2
fibroblast cell line
2
fibroblast of cardiac tissue
2
hematopoietic multipotent progenitor cell
2
hippocampal neuron
2
kidney capillary endothelial cell
2
kidney inner medulla collecting duct intercalated cell
2
left renal cortex interstitium
2
left renal pelvis
2
leukocyte
2
lower motor neuron
2
lymphocyte of B lineage (iPSC)
2
mesendoderm
2
middle frontal gyrus
2
minor salivary gland
2
muscle
2
muscle of arm
2
muscle of leg
2
myeloid dendritic cell
2
pancreatic polypeptide-secreting cell
Organ
3
lung
1
epithelium
1
esophagus
Life stage
1
adult
Date released
1
January, 2022
1
June, 2020
1
March, 2020
1
March, 2024
Software used
1
macs
1
nospecificsoft_customcode
1
qTLtools
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type_category!
ChIP-seq
Showing 4 of 4 results
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Download
FileSet
DSR315SRJ
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Lung.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR873OXX
released
Annotation file set
: lung eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR827TCY
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Esophagus squamous epithelium from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR063XFX
released
Annotation file set
: A target gene prediction annotation in Human Lung of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP