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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
11
candidate regulatory elements
7
target gene predictions
5
binding sites
5
chromatin state
4
accessible chromatin
3
histone modifications
1
caQTL
1
eQTL
1
gene expression
Annotation Category
7
Target gene links
Annotation type Category
6
DNase-seq
4
ChIP-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
1
pCHi-C
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
3
in vitro differentiated cells
2
primary cell
1
cell line
1
stem cell
Biosample term
8
adipose tissue
6
adipocyte
4
fibroblast of dermis
4
fibroblast of lung
4
mesenchymal stem cell
3
fibroblast of cardiac tissue
3
foreskin fibroblast
2
omental fat pad
2
osteoblast
2
skin fibroblast
1
GM23248
1
HT1080
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
adult endothelial progenitor cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
beige adipocyte
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
hepatic stellate cell
1
pericyte cell
1
stromal cell of bone marrow
1
white adipose cell
1
white adipose tissue
Organ
7
connective tissue
3
penis
3
skin of body
Life stage
2
newborn
1
adult
1
embryonic
Date released
4
September, 2022
2
May, 2021
1
March, 2020
Software used
4
r
2
abc
1
nospecificsoft_customcode
Lab
5
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR391CWH
released
Annotation file set
: Target gene predictions for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR923ELC
released
Annotation file set
: Target gene predictions for BSS00697 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR058XGD
released
Annotation file set
: Target gene predictions for BSS00353 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR170XIW
released
Annotation file set
: enhancer-gene predicton of H1_Derived_Mesenchymal_Stem_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR506HNX
released
Annotation file set
: enhancer-gene predicton of foreskin_fibroblast-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR333DPA
released
Annotation file set
: A target gene prediction annotation in Human Mesenchymal Stem Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP