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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
candidate regulatory elements
2
target gene predictions
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
2
Target gene links
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
stem cell
Biosample term
51
HeLa-S3
38
H1-hESC
19
HFFc6
19
heart
16
K562
16
brain
16
lung
16
muscle of arm
14
placenta
14
small intestine
14
stomach
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
13
thymus
12
kidney
11
right lung
10
right kidney
9
adrenal gland
9
left kidney
9
renal cortex interstitium
9
renal pelvis
7
H9
7
lymphocyte
7
spinal cord
6
CD4-positive, alpha-beta memory T cell
6
GM12878
6
olfactory receptor cell
5
neural progenitor cell
5
trophoblast cell
4
CyT49
4
HUES8
4
chorionic villus
4
foreskin keratinocyte
4
heart left ventricle
4
iPSC derived cell line
4
muscle of trunk
3
B cell
3
T-helper 17 cell
3
chorion membrane
3
common myeloid progenitor, CD34-positive
3
endothelial cell of umbilical vein
3
heart right ventricle
3
liver
3
neurosphere
3
neutrophil
3
psoas muscle
3
retina
3
spleen
3
trophoblast
2
22Rv1
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta memory T cell
2
GM18507
2
HCT116
2
HepG2
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
bronchial epithelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
eye
2
fibroblast of cardiac tissue
2
fibroblast of dermis
2
fibroblast of lung
2
foreskin fibroblast
2
hepatocyte
2
keratinocyte
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
mesenchymal stem cell
2
mesendoderm
2
ovary
2
right renal cortex interstitium
2
right renal pelvis
2
sigmoid colon
2
skin fibroblast
2
tongue
1
A673
1
AG04449 cell
1
AG04450 cell
1
Ammon's horn
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
CD14-positive monocyte
1
CD1c-positive myeloid dendritic cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
CWRU1
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
EndoC_BH1
1
G401
1
GM03348
1
GM06990
1
GM08714
1
GM12864
1
GM12865
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
H7-hESC
1
HEK293
1
HEK293T
1
HK-2 cell
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
IMR-90
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
MG63
1
NCI-H460 cell
1
NT2-D1 cell
1
PC-9
1
Panc1
1
SJCRH30
1
SK-N-MC
1
T cell
1
T-helper 1 cell
1
T-helper 2 cell
1
UCSF-4
1
WERI-Rb-1
1
WI38
1
activated CD4-positive, alpha-beta T cell
1
adipocyte
1
adipose tissue
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aorta
1
arm bone
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bladder (urinary bladder)
1
brain microvascular endothelial cell
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
choroid plexus epithelial cell
1
colon carcinoma
1
colon epithelial cell
1
dermis blood vessel endothelial cell
1
dorsolateral prefrontal cortex
1
ectodermal cell
1
embryonic facial prominence
1
embryonic stem cell
1
endocrine pancreas
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
erythroblast
1
esophagus
1
femur
1
fibroblast cell line
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
gastric (mucosa of stomach)
1
germinal center
1
germinal matrix
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hematopoietic multipotent progenitor cell
1
iPS DF 19.11
1
iPS DF 19.7
Organ
2
connective tissue
Life stage
adult
1
embryonic
Date released
1
March, 2020
1
September, 2022
Software used
1
nospecificsoft_customcode
1
r
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
relevant_life_stage!
adult
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR333DPA
released
Annotation file set
: A target gene prediction annotation in Human Mesenchymal Stem Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP