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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
chromatin state
3
target gene predictions
1
binding sites
1
caQTL
1
eQTL
1
gene expression
1
histone modifications
Annotation Category
3
Target gene links
1
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
1
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
stem cell
Biosample term
54
HeLa-S3
39
H1-hESC
23
K562
21
heart
21
neural progenitor cell
20
stomach
19
A549
19
HFFc6
19
brain
17
lung
16
kidney
16
muscle of arm
16
placenta
16
small intestine
15
adrenal gland
14
large intestine
14
thymus
13
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of back
13
muscle of leg
11
B cell
11
breast cancer cell
11
hematopoietic multipotent progenitor cell
11
liver
11
right lung
10
pericyte cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
gastric cancer cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
GM12878
8
Rhabdomyosarcoma
8
endothelial cell
8
heart left ventricle
8
lymphocyte
8
neuroblastoma cell
8
spinal cord
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta memory T cell
7
H9
7
HepG2
7
MCF-7
7
adipose tissue
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
hepatocyte
7
keratinocyte
7
psoas muscle
7
smooth muscle cell
7
spleen
6
Chondroid Chordoma
6
fibroblast
6
fibroblast of cardiac tissue
6
hESC cell
6
liposarcoma
6
mononuclear cell
6
natural killer cell
6
neuroblastoma cell line
6
olfactory receptor cell
6
sigmoid colon
6
squamous cell lung carcinoma
5
CyT49
5
T cell
5
T-cell acute lymphoblastic leukemia
5
foreskin keratinocyte
5
heart right ventricle
5
mammary gland epithelial cell
5
melanoma cell
5
osteosarcoma
5
ovary
5
pancreas
5
regulatory T cell
5
trophoblast cell
4
CD14-positive monocyte
4
HUES8
4
aorta
4
astrocyte
4
body of pancreas
4
bronchial epithelial cell
4
caudate nucleus
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
foreskin fibroblast
4
gastrocnemius medialis
4
iPSC derived cell line
4
layer of hippocampus
4
macrophage
4
mesenchymal stem cell
4
monocyte
4
muscle of trunk
4
pancreatic delta cell
4
pancreatic ductal cell
4
prostate gland
4
retina
4
rhabdomyosarcoma cell
4
skeletal muscle tissue
4
skin fibroblast
4
testis
3
22Rv1
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
Ewing sarcoma
3
GM18507
3
GM19238
3
GM19239
3
GM19240
3
HCT116
3
NAMALWA cell
3
Peyer's patch
3
SK-N-DZ
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
acute myeloid leukemia
3
adipocyte
3
cardiac muscle cell
3
cardiomyocytes (cardiac muscle cell)
3
cerebellum
3
chorion membrane
3
colonic mucosa
3
dermis lymphatic vessel endothelial cell
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
endodermal cell
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
epithelial cell of prostate
3
esophageal squamous cell carcinoma
3
esophagus
3
fibroblast of dermis
3
fibroblast of lung
3
glioblastoma cell
3
glioma cell
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
luminal epithelial cell of mammary gland
3
lymphoblast
3
lymphoblastoid cell line
3
mammary epithelial cell
3
mesendoderm
3
naive T cell
3
neuronal stem cell
3
neurosphere
3
neutrophil
3
osteoblast
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal adenocarcinoma
3
skeletal muscle myoblast
3
substantia nigra
3
thyroid gland
3
transverse colon
3
upper lobe of left lung
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
B-lymphocyte
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO205
2
Caco-2 cell
2
EndoC_BH1
2
GM06990
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18505
2
GM19099
2
GM19193
2
GM23248
2
H7-hESC
2
HAP-1
2
HEK293
2
HK-2 cell
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HuH-7
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
Organ
4
connective tissue
Life stage
1
adult
1
embryonic
Date released
2
September, 2022
1
February, 2021
1
March, 2020
May, 2021
Software used
2
r
1
macs
1
nospecificsoft_customcode
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
May, 2021
Showing 4 of 4 results
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Download
FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR391CWH
released
Annotation file set
: Target gene predictions for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337GCY
released
Annotation file set
: Histone modifications annotation for Others Mesenchymal_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR333DPA
released
Annotation file set
: A target gene prediction annotation in Human Mesenchymal Stem Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP