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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
1
caQTL
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
16
ChIP-seq
11
DNase-seq
5
snATAC-seq
2
RNA-seq
2
snRNA-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
8
fibroblast
7
endothelial cell
6
smooth muscle cell
5
macrophage
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
4
skeletal muscle fiber
3
T cell
3
enterocyte
3
mesenchymal stem cell
3
myofibroblast cell
3
type I muscle cell
3
type II muscle cell
2
Schwann cell
2
adipocyte
2
basal cell
2
epithelial cell of esophagus
2
goblet cell
2
leukocyte
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
skeletal muscle satellite cell
2
vascular associated smooth muscle cell
1
Satellite Cells, Skeletal Muscle
1
bronchial goblet cell
1
cardiac muscle cell
1
cell
1
cortical cell of adrenal gland
1
fibroblast of the aortic adventitia
1
glial cell
1
granulosa cell
1
hepatocyte
1
keratinocyte
1
kidney distal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
neural cell
1
pancreatic endocrine cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic stellate cell
1
parietal cell
1
peptic cell
1
proximal epiphysis of femur
1
proximal tubule cells with injury markers
1
smooth muscle cell of the coronary artery
1
thyroid follicular cell
1
type II pneumocyte
Organ
3
connective tissue
2
musculature of body
Life stage
2
unknown
Date released
2
February, 2024
2
May, 2022
1
October, 2022
Software used
4
macs
1
eigenmt
1
rasqual
Lab
3
Stephen Parker, UMich
2
AMP-T2D consortium
Project
5
AMP
3
ENCODE
RFA
3
AMP2
2
AMP
Showing 5 of 5 results
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FileSet
DSR534XMQ
released
Annotation file set
: Accessible chromatin from snATAC-seq of skeletal muscle satellite cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR707RQM
released
Annotation file set
: Accessible chromatin from snATAC-seq of mesenchymal stem cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR724QWN
released
Annotation file set
: Cell type chromatin broad peaks and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR847RRB
released
Annotation file set
: Cell type chromatin broad peaks and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP