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Citing CMDGA
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Annotation type
1
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
1
Gene expression levels
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
RNA-seq
1
snATAC-seq
1
snRNA-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
14
endothelial cell of hepatic sinusoid
10
hepatocyte
4
skeletal muscle fiber
3
endothelial cell
3
mesenchymal stem cell
3
smooth muscle cell
3
type I muscle cell
3
type II muscle cell
2
adipocyte
2
glial cell
2
leukocyte
2
neural cell
2
skeletal muscle satellite cell
Organ
3
connective tissue
Date released
3
February, 2024
1
October, 2022
Software used
1
deeptools
1
macs
1
qTLtools
1
r
1
samtools
1
umitools
Lab
3
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP2
Showing 3 of 3 results
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FileSet
DSR033HJN
released
Annotation file set
: Expression QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR847RRB
released
Annotation file set
: Cell type chromatin broad peaks and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR543XVO
released
Annotation file set
: Cell type gene expression mean TPM and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP