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Annotation type
3
caQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
endothelial cell
1
coronary artery
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
mesenchymal stem cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
2
epithelium
1
connective tissue
Date released
2
October, 2022
1
February, 2023
Software used
24
macs
15
r
7
abc
3
chromhmm
3
rasqual
3
seurat
2
deeptools
2
deltasvm
2
eigenmt
2
encode-ccres
2
qTLtools
2
samtools
2
umitools
1
cicero
1
nospecificsoft_customcode
Lab
2
Stephen Parker, UMich
1
AMP-T2D consortium
Project
3
AMP
RFA
2
AMP2
1
AMP
biosample_term_name!
right kidney
Showing 3 of 3 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP