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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
3
target gene predictions
2
chromatin state
Annotation Category
5
cis-regulatory elements
3
Target gene links
Annotation type Category
7
ChIP-seq
6
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
2
bed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
2
GRCh38
Organism
8
Homo sapiens
Biosample type
8
in vitro differentiated cells
5
primary cell
1
stem cell
Biosample term
40
hematopoietic multipotent progenitor cell
21
neural progenitor cell
17
adipocyte
11
cardiomyocytes
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
cardiomyocytes (cardiac muscle cell)
8
endodermal cell
8
mesenchymal stem cell
6
cardiac muscle cell
6
cardiac precursors (cardiac muscle cell)
6
dendritic cell
6
embryonic stem cell
6
mesodermal cell
6
muscle cell
5
bipolar neuron
5
mesendoderm
5
neural cell
5
smooth muscle cell
5
trophoblast cell
4
ectodermal cell
4
hepatocyte
4
islet precursor cell
4
neuron
3
cardiac mesoderm primordium
3
hepatocyte(AFP)
3
neuronal stem cell
3
olfactory neurosphere cell line
3
pancreatic ductal cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
cardiac myoblast
2
cardiovascular progenitor cell
2
lymphocyte of B lineage (iPSC)
2
myocyte
2
myotube
2
neuroepithelial stem cell
1
Adipose SGBS cell line (adipocyte)
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
ecto neural progenitor cell
1
endothelial cell
1
excitatory neuron
1
hippocampal neuron
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
lower motor neuron
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
mid-neurogenesis radial glial cells
1
radial glial cell
1
skeletal muscle myoblast
1
stem cell
1
white adipose cell
Organ
8
connective tissue
Life stage
4
embryonic
3
adult
Date released
6
September, 2022
1
February, 2021
1
May, 2021
Software used
4
r
macs
2
chromhmm
1
abc
1
encode-ccres
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
software_used.software.name!
macs
Showing 8 of 8 results
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Download
FileSet
DSR902OPF
released
Annotation file set
: Candidate regulatory elements for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR329XEJ
released
Annotation file set
: Candidate regulatory elements for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR391CWH
released
Annotation file set
: Target gene predictions for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR073XBJ
released
Annotation file set
: Chromatin states for BSS01261 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR625MZJ
released
Annotation file set
: Chromatin states for BSS01260 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR718ELE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR170XIW
released
Annotation file set
: enhancer-gene predicton of H1_Derived_Mesenchymal_Stem_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP