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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
caQTL
1
histone modifications
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
4
ChIP-seq
2
DNase-seq
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
in vitro differentiated cells
2
primary cell
Biosample term
11
foreskin fibroblast
8
osteoblast
6
subcutaneous adipose tissue
5
adipocyte
5
adipose tissue
5
fibroblast of lung
5
mesenchymal stem cell
5
subcutaneous abdominal adipose tissue
4
bone tissue
4
cardiac fibroblast
4
fibroblast
4
fibroblast of mammary gland
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
hepatic stellate cell
4
mesangial cell
3
GM23248
3
adult endothelial progenitor cell
3
fibroblast of cardiac tissue
3
omental fat pad
3
preadipocyte
2
adipose tissue derived mesenchymal stem cell
2
chondrocyte
2
columnar chondrocyte
2
fibroblast of dermis
2
pulmonary interstitial fibroblast
2
skin fibroblast
2
visceral abdominal adipose tissue
1
HT1080
1
brain pericyte
1
cartilage tissue
1
embryonic fibroblast
1
fibroblast of gingiva
1
fibroblast of peridontal ligament
1
fibroblast of skin of abdomen
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
stromal cell of bone marrow
Organ
5
connective tissue
Life stage
1
adult
1
embryonic
Date released
6
September, 2022
4
February, 2021
3
February, 2024
1
June, 2020
1
March, 2020
1
May, 2021
1
May, 2022
1
October, 2019
1
October, 2022
Software used
2
encode-ccres
2
macs
1
eigenmt
1
rasqual
Lab
4
AMP-T2D consortium
1
Stephen Parker, UMich
Project
5
AMP
RFA
4
AMP
1
AMP2
Showing 5 of 5 results
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Download
FileSet
DSR718ELE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR627LDJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337GCY
released
Annotation file set
: Histone modifications annotation for Others Mesenchymal_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR959CJP
released
Annotation file set
: Binding sites annotation for Others Mesenchymal_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP