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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
2
Target gene links
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
stem cell
Biosample term
54
HeLa-S3
39
H1-hESC
26
retina
25
heart
K562
22
stomach
20
pigmented layer of retina
19
A549
19
HFFc6
18
brain
18
monocyte
17
kidney
17
lung
17
muscle of arm
17
small intestine
16
adrenal gland
15
muscle of leg
15
neural progenitor cell
15
placenta
14
large intestine
14
thymus
13
B cell
13
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of back
12
liver
12
right lung
11
hematopoietic multipotent progenitor cell
11
renal pelvis
11
right kidney
10
heart left ventricle
10
renal cortex interstitium
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
adipose tissue
9
left kidney
9
pancreas
9
retinal pigment epithelial cell
9
spinal cord
9
spleen
8
GM12878
8
psoas muscle
7
CD8-positive, alpha-beta memory T cell
7
H9
7
islet of Langerhans
7
lymphocyte
7
regulatory T cell
7
sigmoid colon
6
MCF-7
6
SGBS preadipocytes
6
T-helper 1 cell
6
adipocyte
6
embryonic stem cell
6
heart right ventricle
6
mononuclear cell
6
olfactory receptor cell
6
osteoblast
6
ovary
6
tibial nerve
6
trophoblast cell
5
HUES8
5
T cell
5
T-helper 17 cell
5
T-helper 2 cell
5
caudate nucleus
5
chondrocyte
5
coronary artery
5
endothelial cell of umbilical vein
5
fibroblast of cardiac tissue
5
foreskin keratinocyte
5
gastrocnemius medialis
5
mesenchymal stem cell
5
natural killer cell
5
right atrium auricular region
5
thyroid gland
5
tibial artery
5
transverse colon
4
Ammon's horn
4
CD14-positive monocyte
4
CD8-positive, alpha-beta T cell
4
CyT49
4
HepG2
4
Peyer's patch
4
aorta
4
body of pancreas
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
frontal cortex
4
glutamatergic neuron
4
hepatocyte
4
iPSC derived cell line
4
kidney tubule cell
4
mammary gland epithelial cell
4
muscle of trunk
4
omental fat pad
4
skeletal muscle myoblast
4
skin fibroblast
4
testis
4
trophoblast
4
upper lobe of left lung
3
cardiac fibroblast
3
GM18507
3
GM19240
3
HCT116
3
NAMALWA cell
3
SK-N-DZ
3
ascending aorta
3
breast epithelium
3
bronchial epithelial cell
3
cardiac muscle cell
3
cardiomyocytes (cardiac muscle cell)
3
cerebellum
3
choroid plexus epithelial cell
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
esophagus
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
fibroblast of dermis
3
fibroblast of lung
3
foreskin fibroblast
3
globus pallidus
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
medulla oblongata
3
mesendoderm
3
midbrain
3
naive B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
neutrophil
3
occipital lobe
3
pancreatic beta cell
3
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
superior temporal gyrus
3
thoracic aorta
3
tongue
3
urinary bladder
2
22Rv1
2
A172
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive, alpha-beta T cell
2
CMK
2
Caco-2 cell
2
Caki2
2
Daoy
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM19238
2
GM19239
2
GM23248
2
H4
2
H7-hESC
2
HAP-1
2
HEK293
2
HL-60
2
HT-29
2
HUES6
2
HuH-7
2
IMR-90
2
KARPAS-422 cell
2
KBM-7
2
L1-S8
2
L1-S8R
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
M059J
Life stage
1
embryonic
Date released
1
June, 2020
1
March, 2020
1
September, 2022
Software used
1
macs
1
nospecificsoft_customcode
1
r
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
biosample_term_name!
K562
Showing 3 of 3 results
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Download
FileSet
DSR401CTI
released
Annotation file set
: Target gene predictions for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR746BZC
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC derived mesendodermal cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579JEW
released
Annotation file set
: A target gene prediction annotation in Human Mesendoderm of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP