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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
54
HeLa-S3
39
H1-hESC
26
retina
24
heart
24
kidney
23
K562
22
stomach
20
monocyte
20
pigmented layer of retina
19
A549
19
HFFc6
18
brain
17
B cell
17
endothelial cell
17
muscle of arm
16
fibroblast
16
lung
16
small intestine
15
adrenal gland
15
macrophage
15
muscle of leg
15
placenta
14
large intestine
14
neural progenitor cell
13
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
left lung
13
muscle of back
13
thymus
12
right lung
11
T cell
11
hematopoietic multipotent progenitor cell
11
liver
11
pancreatic beta cell
11
pericyte cell
11
renal pelvis
11
right kidney
10
hepatocyte
10
pancreatic alpha cell
10
renal cortex interstitium
10
retinal pigment epithelial cell
10
smooth muscle cell
9
CD4-positive, alpha-beta memory T cell
9
astrocyte
9
left kidney
9
pancreatic ductal cell
9
regulatory T cell
9
spinal cord
8
EndoC_BH1
8
GM12878
8
adipocyte
8
adipose tissue
8
heart left ventricle
8
islet of Langerhans
8
natural killer cell
8
pancreatic acinar cell
8
pancreatic delta cell
8
spleen
7
CD8-positive, alpha-beta T cell
7
CD8-positive, alpha-beta memory T cell
7
H9
7
fibroblast of cardiac tissue
7
lymphocyte
7
pancreas
6
MCF-7
6
SGBS preadipocytes
6
T-helper 1 cell
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
erythroblast
6
glutamatergic neuron
6
mononuclear cell
6
olfactory receptor cell
6
osteoblast
6
sigmoid colon
6
skeletal muscle satellite cell
6
tibial nerve
6
trophoblast cell
5
HUES8
5
T-helper 17 cell
5
T-helper 2 cell
5
caudate nucleus
5
chondrocyte
5
coronary artery
5
foreskin keratinocyte
5
gastrocnemius medialis
5
inhibitory neuron
5
mammary gland epithelial cell
5
memory B cell
5
mesenchymal stem cell
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
ovary
5
pancreatic stellate cell
5
psoas muscle
5
right atrium auricular region
5
skeletal muscle fiber
5
skin fibroblast
5
thyroid gland
5
tibial artery
5
transverse colon
4
CD14-positive monocyte
4
CyT49
4
Peyer's patch
4
body of pancreas
4
chorion membrane
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
frontal cortex
4
glomerular visceral epithelial cell
4
heart right ventricle
4
hepatic stellate cell
4
iPSC derived cell line
4
keratinocyte
4
kidney tubule cell
4
megakaryocyte
4
muscle of trunk
4
omental fat pad
4
skeletal muscle myoblast
4
testis
4
type II pneumocyte
4
upper lobe of left lung
3
cardiac fibroblast
3
Ammon's horn
3
CD4-positive, alpha-beta T cell
3
GM18507
3
GM19240
3
HCT116
3
HepG2
3
NAMALWA cell
3
SK-N-DZ
3
activated CD4-positive, alpha-beta T cell
3
ascending aorta
3
breast epithelium
3
bronchial epithelial cell
3
cardiac muscle cell
3
cerebellum
3
choroid plexus epithelial cell
3
cortical cell of adrenal gland
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
fibroblast of dermis
3
fibroblast of lung
3
foreskin fibroblast
3
gabaergic neuron
3
globus pallidus
3
glomerular endothelial cell
3
immortal human breast epithelial cell line cell
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
luminal epithelial cell of mammary gland
3
medulla oblongata
3
midbrain
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neuron
3
neurosphere
3
neutrophil
3
occipital lobe
3
pancreatic polypeptide-secreting cell
3
plasmacytoid dendritic cell
3
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
superior temporal gyrus
3
thoracic aorta
3
tongue
3
trophoblast
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
3
urinary bladder
2
22Rv1
2
A172
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
Life stage
1
embryonic
Date released
1
June, 2020
March, 2020
1
September, 2022
Software used
abc
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
software_used.software.name!
abc
month_released!
March, 2020
Showing 2 of 2 results
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Download
FileSet
DSR401CTI
released
Annotation file set
: Target gene predictions for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR746BZC
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC derived mesendodermal cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP