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Schema
Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
ChIP-seq
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
51
HeLa-S3
45
H1-hESC
39
monocyte
38
endothelial cell
38
islet of Langerhans
28
fibroblast
28
macrophage
23
retina
21
EndoC_BH1
21
hepatocyte
21
smooth muscle cell
20
pigmented layer of retina
19
HFFc6
19
pancreatic ductal cell
19
pericyte cell
18
neural progenitor cell
18
pancreatic beta cell
18
subcutaneous adipose tissue
17
pancreatic alpha cell
16
K562
16
epithelial cell of proximal tubule
16
induced pluripotent stem cell
16
pancreatic acinar cell
16
pancreatic delta cell
15
kidney
15
liver
14
excitatory neuron
14
glomerular endothelial cell
13
regulatory T cell
11
adipose tissue
11
astrocyte
11
cardiomyocytes
10
CD8-positive, alpha-beta T cell
10
T cell
10
T-helper 1 cell
10
T-helper 17 cell
10
coronary artery
10
endothelial cell of hepatic sinusoid
10
pancreatic stellate cell
9
B cell
9
extended pluripotent stem (EPS) cells
9
memory B cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
progenitor cell of endocrine pancreas
9
right atrium auricular region
9
skeletal muscle fiber
9
tibial nerve
8
adipocyte
8
cardiomyocytes (cardiac muscle cell)
8
embryonic stem cell
8
glutamatergic neuron
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
omental fat pad
8
skeletal muscle satellite cell
8
tibial artery
7
cerebellum
7
frontal cortex
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mesangial cell
7
natural killer cell
7
putamen
7
retinal pigment epithelial cell
7
substantia nigra
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
Ammon's horn
6
GM12878
6
H9
6
T-helper 2 cell
6
amygdala
6
anterior cingulate cortex
6
body of pancreas
6
cardiac precursors (cardiac muscle cell)
6
caudate nucleus
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
erythroblast
6
gamma-delta T cell
6
glomerular visceral epithelial cell
6
heart left ventricle
6
hypothalamus
6
iPSC derived cell line
6
lymphoblastoid cell line
6
lymphocyte
6
mesenchymal stem cell
6
naive B cell
6
nucleus accumbens
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
SGBS preadipocytes
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
ascending aorta
5
basal cell
5
central memory CD8-positive, alpha-beta T cell
5
cerebellum (Hemisphere)
5
chondrocyte
5
effector memory CD8-positive, alpha-beta T cell
5
gabaergic neuron
5
gastrocnemius medialis(Muscle - Skeletal)
5
heart
5
inhibitory neuron
5
keratinocyte
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
neutrophil
5
pancreatic endothelial cell
5
right lobe of liver
4
CD4-positive, alpha-beta T cell
4
CyT49
4
HUES8
4
Schwann cell
4
activated CD4-positive, alpha-beta T cell
4
adult endothelial progenitor cell
4
blood vessel smooth muscle cell
4
bone tissue
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
kidney connecting tubule epithelial cell
4
leukocyte
4
luminal epithelial cell of mammary gland
4
mast cell
4
mature natural killer cell
4
megakaryocyte
4
memory T cell
4
memory regulatory T cell
4
mesothelial cell
4
myofibroblast cell
4
nephron progenitor
4
osteoblast
4
pancreas
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
Date released
1
March, 2020
Software used
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
ChIP-seq
DNase-seq
Showing 1 of 1 results
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Download
FileSet
DSR579JEW
released
Annotation file set
: A target gene prediction annotation in Human Mesendoderm of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP