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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
gene expression
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
Annotation type Category
2
snATAC-seq
2
snRNA-seq
Available data
2
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
6
adipocyte
4
endothelial cell
4
mesenchymal stem cell
4
skeletal muscle fiber
4
smooth muscle cell
4
type I muscle cell
4
type II muscle cell
2
ESC derived cell line
2
glial cell
2
leukocyte
2
neural cell
2
skeletal muscle satellite cell
1
CD34-PB
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
fibroblast of lung
1
islet of Langerhans
1
keratinocyte
1
layer of hippocampus
1
liver
1
mammary epithelial cell
1
mid-frontal lobe
1
mucosa of rectum
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
stomach smooth muscle
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
0
BE(2)-C
Organ
4
musculature of body
Date released
4
February, 2024
Software used
2
deeptools
2
macs
2
r
2
samtools
2
umitools
Lab
15
AMP-T2D consortium
5
Bing Ren, UCSD
4
Stephen Parker, UMich
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP2
Showing 4 of 4 results
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Download
FileSet
DSR887UQH
released
Annotation file set
: Cell type chromatin broad peaks and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR353GUO
released
Annotation file set
: Cell type chromatin broad peaks and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR040MIE
released
Annotation file set
: Cell type gene expression mean TPM and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR985XYU
released
Annotation file set
: Cell type gene expression mean TPM and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP