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Schema
Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
in vitro differentiated cells
1
stem cell
Biosample term
128
monocyte
90
heart
84
stomach
81
kidney
73
brain
68
lung
67
muscle of arm
63
HeLa-S3
62
small intestine
61
A549
60
adrenal gland
59
placenta
57
muscle of leg
55
large intestine
54
muscle of back
53
H1-hESC
53
common myeloid progenitor, CD34-positive
52
left lung
48
liver
47
thymus
45
right lung
44
CD8-positive, alpha-beta T cell
44
islet of Langerhans
42
right kidney
40
K562
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
35
B cell
34
heart left ventricle
34
spinal cord
32
CD4-positive, alpha-beta memory T cell
32
spleen
30
adipose tissue
30
hepatocyte
26
regulatory T cell
25
MCF-7
25
tibial nerve
23
T-helper 1 cell
23
body of pancreas
23
epithelial cell of proximal tubule
22
CD8-positive, alpha-beta memory T cell
22
caudate nucleus
22
endothelial cell
22
sigmoid colon
21
EndoC_BH1
21
T-helper 17 cell
21
glomerular endothelial cell
21
pancreas
21
subcutaneous adipose tissue
20
breast cancer cell
20
mononuclear cell
20
pigmented layer of retina
19
coronary artery
19
foreskin keratinocyte
19
heart right ventricle
19
ovary
19
psoas muscle
19
right atrium auricular region
18
HFFc6
18
endothelial cell of umbilical vein
18
foreskin fibroblast
18
macrophage
18
substantia nigra
18
tibial artery
17
T-helper 2 cell
17
gastrocnemius medialis
17
natural killer cell
17
omental fat pad
17
testis
17
thyroid gland
17
transverse colon
17
trophoblast cell
16
CD14-positive monocyte
16
HepG2
16
T cell
16
chorionic villus
16
keratinocyte
16
layer of hippocampus
16
muscle of trunk
16
osteoblast
16
pancreatic ductal cell
16
skeletal muscle tissue
16
upper lobe of left lung
15
GM12878
15
ascending aorta
15
cerebellum
15
fibroblast of lung
15
frontal cortex
15
neutrophil
15
skeletal muscle myoblast
14
H9
14
endocrine pancreas
14
endothelial cell of hepatic sinusoid
14
prostate gland
14
putamen
13
CD4-positive, alpha-beta T cell
13
Peyer's patch
13
aorta
13
bronchial epithelial cell
13
fibroblast of cardiac tissue
13
neurosphere
13
temporal lobe
12
Ammon's horn
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
neuroblastoma cell
12
pancreatic beta cell
11
fibroblast of dermis
11
glomerular visceral epithelial cell
11
left cardiac atrium
11
left renal pelvis
11
mammary epithelial cell
11
mammary gland epithelial cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
right renal pelvis
10
22Rv1
10
Rhabdomyosarcoma
10
breast epithelium
10
choroid plexus epithelial cell
10
epithelial cell of prostate
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
fibroblast
10
gastric cancer cell
10
kidney tubule cell
10
lymphocyte
10
pancreatic alpha cell
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
HEK293
9
SK-N-DZ
9
colonic mucosa
9
esophagus
9
hepatic stellate cell
9
liposarcoma
9
pancreatic acinar cell
9
parathyroid adenoma
9
skeletal muscle satellite cell
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM06990
8
GM12865
8
NAMALWA cell
8
cardiac muscle cell
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
8
pancreatic delta cell
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CMK
7
Caco-2 cell
7
GM12864
7
HT-29
7
IMR-90
7
SK-N-MC
7
SK-N-SH
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
eye
7
fibroblast of pulmonary artery
7
kidney glomerular epithelial cell
7
mature neutrophil
7
mesenchymal stem cell
7
pancreatic stellate cell
7
renal cortical epithelial cell
7
right lobe of liver
7
skin fibroblast
7
smooth muscle cell
7
stomach smooth muscle
6
Brodmann (1909) area 46
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12875
6
GM12892
6
GM18507
Date released
1
March, 2020
Software used
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
lab.title!
Jesse Engreitz, Stanford University
biosample_type!
in vitro differentiated cells
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR579JEW
released
Annotation file set
: A target gene prediction annotation in Human Mesendoderm of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP