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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
22
kidney
21
stomach
19
heart
17
lung
17
muscle of arm
15
epithelial cell of proximal tubule
15
muscle of back
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
small intestine
13
brain
13
glomerular endothelial cell
13
left lung
12
placenta
11
cardiomyocytes
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
9
hematopoietic multipotent progenitor cell
9
induced pluripotent stem cell
9
left kidney
9
spleen
9
thymus
8
CD4-positive, alpha-beta T cell
7
CD8-positive, alpha-beta T cell
7
foreskin keratinocyte
7
islet of Langerhans
7
kidney loop of Henle thin ascending limb epithelial cell
7
spinal cord
6
H9
6
heart left ventricle
6
kidney interstitial cell
6
liver
6
subcutaneous adipose tissue
5
B cell
5
CD4-positive, alpha-beta memory T cell
5
cardiac muscle cell
5
foreskin fibroblast
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
CD14-positive monocyte
4
MCF-7
4
Peyer's patch
4
T-cell
4
WI38
4
adipose tissue
4
body of pancreas
4
bone tissue
4
chorionic villus
4
dermis blood vessel endothelial cell
4
endothelial cell
4
endothelial cell of umbilical vein
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
hepatocyte
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
mesangial cell
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
natural killer cell
4
nephron progenitor
4
neurosphere
4
ovary
4
peripheral blood mononuclear cell
4
right renal pelvis
4
skeletal muscle tissue
4
testis
4
thyroid gland
4
transverse colon
4
trophoblast cell
4
upper lobe of left lung
3
A549
3
MCF 10A
3
S-shaped body
3
T-helper 1 cell
3
adipocyte
3
adult endothelial progenitor cell
3
ascending aorta
3
breast epithelium
3
cardiac fibroblast
3
cardiac precursors (cardiac muscle cell)
3
endocrine pancreas
3
esophagus muscularis mucosa
3
fibroblast of lung
3
foreskin melanocyte
3
heart right ventricle
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
layer of hippocampus
3
mammary epithelial cell
3
mesodermal cell
3
omental fat pad
3
pancreas
3
parathyroid adenoma
3
psoas muscle
3
retina
3
right renal cortex interstitium
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
2
22Rv1
2
AG10803
2
HEK293
2
HeLa-S3
2
Kupffer cell
2
LNCAP
2
NAMALWA
2
SK-N-DZ
2
SK-N-SH
2
T-helper 17 cell
2
T-helper 2 cell
2
angular gyrus
2
aorta
2
bronchial epithelial cell
2
cardiac myoblast
2
cardiomyocytes (cardiac muscle cell)
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
dermis microvascular lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
esophagus
2
eye
2
fibroblast of breast
2
gamma-delta T cell
2
kidney inner medulla collecting duct intercalated cell
2
lung microvascular endothelial cell
2
mesenchymal stem cell
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myocyte
2
myoepithelial cell of mammary gland
2
neural cell
2
neuroepithelial stem cell
2
neuronal stem cell
2
neutrophil
2
osteoblast
2
pancreatic alpha cell
2
placental basal plate
2
prostate gland
2
regulatory T cell
2
renal vesicle
2
skeletal muscle myoblast
2
stomach smooth muscle
2
thoracic aorta
2
tongue
2
trophoblast
2
uterus
2
vagina
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
Ammon's horn
1
BE2C
1
BJ
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta memory T cell
1
CMK
1
Caco-2
1
Caki2
1
D721Med
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
G401
Life stage
1
embryonic
Date released
3
September, 2022
1
February, 2021
1
March, 2020
1
May, 2021
Software used
macs
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
software_used.software.name!
macs
Showing 1 of 1 results
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Download
FileSet
DSR832JXZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesendoderm
Lab:
AMP-T2D consortium
Project:
AMP