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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
89
monocyte
60
A549
53
common myeloid progenitor, CD34-positive
41
hematopoietic multipotent progenitor cell
38
CD8-positive, alpha-beta T cell
32
B cell
32
CD4-positive, alpha-beta memory T cell
26
stomach
24
MCF-7
24
adrenal gland
24
liver
24
spleen
23
K562
22
CD8-positive, alpha-beta memory T cell
21
foreskin keratinocyte
20
breast cancer cell
20
mononuclear cell
20
neural progenitor cell
20
sigmoid colon
19
adipose tissue
17
foreskin fibroblast
17
heart left ventricle
16
CD14-positive monocyte
16
body of pancreas
15
fibroblast of lung
15
gastrocnemius medialis
15
keratinocyte
15
layer of hippocampus
15
psoas muscle
15
thyroid gland
15
transverse colon
15
upper lobe of left lung
14
endocrine pancreas
14
endothelial cell of umbilical vein
13
HepG2
13
Peyer's patch
13
T cell
13
adipocyte
13
skeletal muscle tissue
13
tibial nerve
12
HeLa-S3
12
bronchial epithelial cell
12
caudate nucleus
12
kidney
12
mammary gland epithelial cell
12
natural killer cell
12
neuroblastoma cell
12
regulatory T cell
11
CD4-positive, alpha-beta T cell
11
T-helper 17 cell
11
T-helper 2 cell
11
fibroblast of dermis
11
prostate gland
11
skeletal muscle myoblast
11
temporal lobe
10
22Rv1
10
T-helper 1 cell
10
gastric cancer cell
10
mammary epithelial cell
10
small intestine
10
substantia nigra
9
Rhabdomyosarcoma
9
SK-N-DZ
9
SK-N-SH
9
aorta
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
esophagus squamous epithelium
9
heart
9
heart right ventricle
9
liposarcoma
9
neutrophil
9
osteoblast
9
ovary
9
pancreas
9
parathyroid adenoma
8
GM12878
8
NAMALWA cell
8
breast epithelium
8
cingulate gyrus
8
coronary artery
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
fibroblast of cardiac tissue
8
immortal human breast epithelial cell line cell
8
lower leg skin
8
lung
8
myoepithelial cell of mammary gland
8
naive T cell
8
omental fat pad
8
testis
8
thoracic aorta
7
B-lymphoblastoid cell line
7
GM06990
7
GM12864
7
GM12865
7
GM12875
7
HL-60
7
LNCaP clone FGC
7
SK-N-MC
7
T47D
7
angular gyrus
7
cerebellum
7
dermis lymphatic vessel endothelial cell
7
embryonic stem cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
fibroblast cell line
7
foreskin melanocyte
7
hepatocyte
7
mature neutrophil
7
mesenchymal stem cell
7
stomach smooth muscle
7
tibial artery
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Brodmann (1909) area 46
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM08714
6
GM12891
6
GM12892
6
GM19238
6
GM19239
6
GM19240
6
GM23248
6
HAP-1
6
HT-29
6
KARPAS-422 cell
6
LHCN-M2
6
MG63
6
MM.1S
6
NT2-D1 cell
6
OCI-LY1
6
OCI-LY7
6
PC-3
6
RWPE1
6
T-cell acute lymphoblastic leukemia
6
WERI-Rb-1
6
WI38
6
ascending aorta
6
esophagus
6
esophagus muscularis mucosa
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
hESC cell
6
kidney tubule cell
6
mucosa of rectum
6
neuroblastoma cell line
6
thymus
6
vagina
5
CD14-positive, CD16-negative classical monocyte
5
Daoy
5
Ewing sarcoma
5
GM10248
5
GM10266
5
HK-2 cell
5
HuH-7
5
KBM-7
5
LoVo cell
5
NB4
5
OCI-LY3
5
PC-9
5
RPMI8226
5
SJSA1
5
SW480
5
astrocyte
5
cardiac muscle cell
5
choroid plexus epithelial cell
5
muscle layer of colon
5
muscle layer of duodenum
5
osteosarcoma
5
prostate cancer cell line
5
retinal pigment epithelial cell
4
A172
4
A673
4
ACC112
4
ACHN
4
Ammon's horn
4
C4-2B
4
Caki2
4
DND-41
4
DOHH2
4
EH
4
EL
4
ELR
4
G401
4
GM04503
4
GM04504
4
GM12873
4
GM18507
4
GM23338
4
H4
Life stage
embryonic
Date released
2
February, 2021
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
relevant_life_stage!
embryonic
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR042QDJ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR827VVM
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP