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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
21
heart
19
A549
19
stomach
18
brain
16
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
liver
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
K562
8
heart left ventricle
8
spinal cord
7
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
6
MCF-7
6
adipocyte
6
adipose tissue
6
endothelial cell of umbilical vein
fibroblast of lung
6
left cardiac atrium
6
mononuclear cell
6
spleen
5
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
5
heart right ventricle
5
sigmoid colon
5
temporal lobe
5
trophoblast cell
4
CD14-positive monocyte
4
HeLa-S3
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
erythroblast
4
fibroblast of dermis
4
foreskin fibroblast
4
foreskin keratinocyte
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
psoas muscle
4
skeletal muscle myoblast
4
thyroid gland
4
tibial nerve
4
transverse colon
3
CD4-positive, alpha-beta T cell
3
GM12878
3
H1-hESC
3
HepG2
3
Peyer's patch
3
SK-N-SH
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
ascending aorta
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
coronary artery
3
duodenal mucosa
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
islet of Langerhans
3
keratinocyte
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
mucosa of rectum
3
naive T cell
3
natural killer cell
3
neurosphere
3
pancreas
3
regulatory T cell
3
retina
3
right cardiac atrium
3
skeletal muscle tissue
3
stomach smooth muscle
3
substantia nigra
3
testis
3
thoracic aorta
3
tibial artery
3
upper lobe of left lung
2
22Rv1
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
Caco-2 cell
2
ESC derived cell line
2
GM06990
2
GM08714
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM19238
2
GM19239
2
GM19240
2
HEK293
2
HL-60
2
IMR-90
2
KARPAS-422 cell
2
LNCaP clone FGC
2
NAMALWA cell
2
NB4
2
NT2-D1 cell
2
SK-N-DZ
2
SK-N-MC
2
T47D
2
WERI-Rb-1
2
breast epithelium
2
bronchial epithelial cell
2
cardiac muscle cell
2
cerebellum
2
choroid plexus epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
frontal cortex
2
germinal matrix
2
hepatocyte
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mammary epithelial cell
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
osteoblast
2
parathyroid adenoma
2
prostate gland
2
rectum smooth muscle tissue
2
retinal pigment epithelial cell
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle satellite cell
2
skin fibroblast
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG20443
1
Ammon's horn
1
BL-2 cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
Life stage
1
embryonic
Date released
1
September, 2022
Software used
3
macs
2
r
1
abc
1
chromhmm
1
encode-ccres
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
fibroblast of lung
Showing 1 of 1 results
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Download
FileSet
DSR387DPA
released
Annotation file set
: Chromatin states for BSS01263 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP