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Citing CMDGA
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Annotation type
2
hQTL
1
eQTL
1
meQTL
1
sQTL
Annotation Category
84
cis-regulatory elements
13
Gene expression levels
5
Genetic variant effects
Annotation type Category
2
ChIP-seq
2
RNA-seq
1
DNA methylation profiling by array assay
Available data
2
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
8
subcutaneous adipose tissue
6
islet of Langerhans
5
caudate nucleus
5
monocyte
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neutrophil
5
omental fat pad
5
putamen
5
tibial nerve
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
amygdala
4
anterior cingulate cortex
4
ascending aorta
4
body of pancreas
4
cartilage tissue
4
cerebellum
4
cerebellum (Hemisphere)
4
coronary artery
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
frontal cortex
4
gastrocnemius medialis(Muscle - Skeletal)
4
hypothalamus
4
left ventricle myocardium
4
nucleus accumbens
4
right atrium auricular region
4
right lobe of liver
4
substantia nigra
4
tibial artery
3
liver
2
adipose tissue
2
blood
1
cardiac fibroblast
1
cerebrospinal fluid
1
globus pallidus
1
heart left ventricle
1
hepatic stellate cell
1
kidney glomerular epithelial cell
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
nephron tubule
1
pancreas
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic polypeptide-secreting cell
1
pons
1
progenitor cell
1
renal glomerulus
1
retina
1
skeletal muscle tissue
1
superior temporal gyrus
1
synovial joint
Life stage
5
adult
Date released
5
May, 2021
Software used
5
limix
2
macs
1
minfi
1
sqtlseeker
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR650UBZ
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR930EID
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP