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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
86
histone modifications
18
accessible chromatin
15
gene expression
4
eQTL
2
hQTL
2
target gene predictions
1
binding sites
1
meQTL
1
sQTL
Annotation Category
2
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
pCHi-C
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
cell line
Biosample term
21
heart
21
stomach
19
CD14-positive monocyte
17
adrenal gland
17
brain
17
lung
17
small intestine
16
muscle of arm
16
placenta
15
kidney
15
thymus
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
11
hematopoietic multipotent progenitor cell
11
liver
11
right lung
10
B cell
10
pericyte cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
adipose tissue
9
endothelial cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spleen
8
psoas muscle
8
spinal cord
7
CD8-positive, alpha-beta memory T cell
7
adipocyte
7
heart left ventricle
7
mononuclear cell
7
sigmoid colon
7
smooth muscle cell
7
trophoblast cell
6
dendritic cell
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
fibroblast
6
fibroblast of lung
6
foreskin fibroblast
6
keratinocyte
6
mammary gland epithelial cell
6
olfactory receptor cell
6
ovary
6
pancreas
5
CD8-positive, alpha-beta T cell
5
body of pancreas
5
fibroblast of dermis
5
foreskin keratinocyte
5
gastrocnemius medialis
5
heart right ventricle
5
hepatocyte
5
mammary epithelial cell
5
mesenchymal stem cell
5
muscle of trunk
5
natural killer cell
5
neural progenitor cell
5
osteoblast
5
regulatory T cell
5
skeletal muscle myoblast
5
thyroid gland
5
transverse colon
4
T cell
4
aorta
4
astrocyte
4
bronchial epithelial cell
4
chorionic villus
4
endocrine pancreas
4
erythroblast
4
fibroblast of cardiac tissue
4
layer of hippocampus
4
mesendoderm
4
neuronal stem cell
4
pancreatic delta cell
4
pancreatic ductal cell
4
prostate gland
4
retina
4
testis
4
trophoblast
4
upper lobe of left lung
3
CD4-positive, alpha-beta T cell
3
Peyer's patch
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
breast epithelium
3
cardiac muscle cell
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
chorion membrane
3
colon epithelial cell
3
coronary artery
3
epithelial cell of prostate
3
esophagus
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
islet of Langerhans
3
luminal epithelial cell of mammary gland
3
macrophage
3
monocyte
3
myotube
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
retinal pigment epithelial cell
3
skeletal muscle tissue
3
skin fibroblast
3
tibial nerve
3
type B pancreatic cell
2
Ammon's horn
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
T-cell
2
Th1 cell
2
activated CD4-positive, alpha-beta T cell
2
angular gyrus
2
aortic adventitial fibroblast
2
ascending aorta
2
bipolar neuron
2
blood vessel smooth muscle cell
2
cerebellum
2
choroid plexus epithelial cell
2
cingulate gyrus
2
colon adenocarcinoma
2
colonic mucosa
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
embryonic stem cell
2
endodermal cell
2
enteric smooth muscle cell
2
epithelial cell of proximal tubule
2
erythroid progenitor cell
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin melanocyte
2
frontal cortex
2
gabaergic neuron
2
glutamatergic neuron
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
mast cell
2
megakaryocyte
2
memory B cell
2
midbrain
2
mononuclear cell of bone marrow
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
neuroblastoma cell line
2
omental fat pad
2
parathyroid adenoma
2
peripheral blood-derived erythroblast
2
plasma cell
2
pulmonary artery endothelial cell
2
renal epithelial cell
2
right atrium auricular region
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
tracheal epithelial cell
2
type II pneumocyte
2
urinary bladder
2
uterus
2
vagina
1
Adipose stromal cell
1
B cell, CD19-positive
1
BICR 31
1
CD34-positive, CD38-negative hematopoietic stem cell
Date released
1
February, 2021
1
January, 2021
1
May, 2020
Software used
1
chicago
1
cicero
1
macs
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
biosample_term_name!
BL-41 cell
biosample_type!
cell line
Showing 3 of 3 results
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Download
FileSet
DSR431VOC
released
Annotation file set
: Binding sites annotation for Blood Monocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR158NKH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR499JJX
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of monocyte
Lab:
AMP-T2D consortium
Project:
AMP