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Annotation type
86
histone modifications
18
accessible chromatin
15
gene expression
2
hQTL
2
target gene predictions
1
binding sites
1
eQTL
1
meQTL
1
sQTL
Annotation Category
2
Target gene links
1
Genetic variant effects
Annotation type Category
1
RNA-seq
1
pCHi-C
1
snATAC-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
54
HeLa-S3
38
H1-hESC
22
K562
20
heart
19
HFFc6
19
stomach
18
A549
17
lung
16
brain
16
muscle of arm
16
small intestine
15
adrenal gland
15
kidney
15
liver
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
13
thymus
11
right lung
10
adipose tissue
10
hematopoietic multipotent progenitor cell
10
islet of Langerhans
10
right kidney
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
7
CD8-positive, alpha-beta memory T cell
7
GM12878
7
H9
7
heart left ventricle
7
lymphocyte
7
psoas muscle
7
spinal cord
7
spleen
6
mononuclear cell
6
olfactory receptor cell
6
sigmoid colon
5
MCF-7
5
body of pancreas
5
heart right ventricle
5
neural progenitor cell
5
ovary
5
subcutaneous adipose tissue
5
trophoblast cell
4
CD14-positive monocyte
4
CyT49
4
HUES8
4
T cell
4
aorta
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
foreskin keratinocyte
4
gastrocnemius medialis
4
iPSC derived cell line
4
muscle of trunk
4
natural killer cell
4
neutrophil
4
omental fat pad
4
pancreas
4
regulatory T cell
4
skeletal muscle tissue
4
thyroid gland
4
tibial nerve
4
transverse colon
3
Ammon's horn
3
HCT116
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
ascending aorta
3
cardiomyocytes (cardiac muscle cell)
3
cerebellum
3
chorion membrane
3
coronary artery
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
esophagus
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
frontal cortex
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
monocyte
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neurosphere
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
retina
3
right atrium auricular region
3
substantia nigra
3
testis
3
tibial artery
3
trophoblast
3
upper lobe of left lung
2
22Rv1
2
Brodmann (1909) area 46
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
HepG2
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
activated CD4-positive, alpha-beta T cell
2
adipocyte
2
angular gyrus
2
blood
2
breast epithelium
2
bronchial epithelial cell
2
cartilage tissue
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
hepatocyte
2
keratinocyte
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
macrophage
2
megakaryocyte
2
mesendoderm
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
parathyroid adenoma
2
prostate gland
2
putamen
2
right cardiac atrium
2
right lobe of liver
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skin fibroblast
2
stomach smooth muscle
2
temporal lobe
2
thoracic aorta
2
tongue
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
C1 segment of cervical spinal cord
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
Life stage
1
adult
Date released
1
January, 2021
1
May, 2020
1
May, 2021
Software used
qTLtools
abc
1
chicago
1
cicero
1
limix
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
software_used.software.name!
qTLtools
abc
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR158NKH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR499JJX
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of monocyte
Lab:
AMP-T2D consortium
Project:
AMP