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Schema
Citing CMDGA
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Annotation type
87
histone modifications
21
accessible chromatin
7
target gene predictions
4
candidate regulatory elements
3
chromatin state
2
binding sites
2
eQTL
2
hQTL
1
caQTL
1
gene expression
1
meQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
3
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
9
islet of Langerhans
5
liver
4
subcutaneous adipose tissue
3
adipose tissue
2
blood
2
cartilage tissue
2
skeletal muscle tissue
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
body of pancreas
1
caudate nucleus
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
hypothalamus
1
kidney
1
left ventricle myocardium
1
mesenchymal stem cell
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron tubule
1
neutrophil
1
nucleus accumbens
1
omental fat pad
1
progenitor cell
1
putamen
1
renal glomerulus
1
right atrium auricular region
1
right lobe of liver
1
smooth muscle cell
1
substantia nigra
1
synovial joint
1
tibial artery
1
tibial nerve
1
type I muscle cell
1
type II muscle cell
Organ
1
connective tissue
Life stage
1
adult
Date released
1
February, 2024
1
May, 2021
Software used
1
limix
1
qTLtools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR033HJN
released
Annotation file set
: Expression QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP