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Schema
Citing CMDGA
Clear Filters
Annotation type
15
gene expression
5
accessible chromatin
3
target gene predictions
2
hQTL
2
histone modifications
1
binding sites
1
eQTL
1
meQTL
1
sQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
1
DNA methylation profiling by array assay
1
RNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
10
islet of Langerhans
6
liver
4
subcutaneous adipose tissue
3
adipose tissue
2
articular chondrocyte
2
blood
2
cartilage tissue
2
monocyte
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
skeletal muscle tissue
1
endothelial cell
1
kidney
1
mesenchymal stem cell
1
nephron tubule
1
omental fat pad
1
progenitor cell
1
renal glomerulus
1
smooth muscle cell
1
synovial joint
1
type I muscle cell
1
type II muscle cell
Life stage
2
adult
Date released
2
May, 2021
Software used
2
limix
1
minfi
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
cortex
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GRCh38
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Download
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP