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Citing CMDGA
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Annotation type
87
histone modifications
18
accessible chromatin
15
gene expression
6
target gene predictions
4
candidate regulatory elements
3
eQTL
2
chromatin state
2
hQTL
2
pQTL
1
binding sites
1
meQTL
1
sQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
3
RNA-seq
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
9
islet of Langerhans
6
liver
5
subcutaneous adipose tissue
3
adipose tissue
2
blood
2
cartilage tissue
2
omental fat pad
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
body of pancreas
1
caudate nucleus
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
hypothalamus
1
kidney
1
left ventricle myocardium
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron tubule
1
neutrophil
1
nucleus accumbens
1
progenitor cell
1
putamen
1
renal glomerulus
1
right atrium auricular region
1
right lobe of liver
1
skeletal muscle tissue
1
substantia nigra
1
synovial joint
1
tibial artery
1
tibial nerve
Organ
2
connective tissue
Life stage
3
adult
Date released
2
August, 2021
1
May, 2021
Software used
qTLtools
2
fastqtl
2
peer
1
limix
Lab
2
ITG
1
AMP-T2D consortium
Project
2
ITG
1
AMP
RFA
2
ITG
1
AMP
software_used.software.name!
qTLtools
Showing 3 of 3 results
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FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP