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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
18
accessible chromatin
3
differential activity
3
eQTL
3
gene expression
3
target gene predictions
2
histone modifications
1
binding sites
Annotation Category
3
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
1
scRNA-seq
Available data
3
tsv
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
11
cardiomyocytes
11
neural progenitor cell
10
H1-hESC
10
progenitor cell of endocrine pancreas
9
EndoC_BH1
9
breast cancer cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
8
islet of Langerhans
8
kidney
7
melanoma
7
pancreatic ductal cell
6
fibroblast cell line
5
endothelial cell
5
prostate cancer cell line
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
embryonic stem cell
4
foreskin fibroblast
4
glioblastoma multiforme cancer stem cell
4
keratinocyte
4
mammary epithelial cell
4
nephron progenitor
4
neuroblastoma cell
4
osteoblast
3
HepG2
3
MCF-7
3
S-shaped body
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
Tumor-derived cell line
3
acute myeloid leukemia
3
cardiac muscle cell
3
central memory CD8-positive, alpha-beta T cell
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
effector memory CD8-positive, alpha-beta T cell
3
heart
3
hepatocyte(AFP)
3
kidney interstitial cell
3
liposarcoma
3
memory B cell
3
monocyte
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuronal stem cell
3
regulatory T cell
3
synovial sarcoma cell
3
triple-negative breast cancer
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
B cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
CD8-positive, alpha-beta T cell
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HEK293-T-REx cell
2
HL-60
2
HS-SY-2 cell
2
IMR-90
2
Jurkat
2
K562
2
Mantle cell lymphoma
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUM-185PE cell
2
T follicular helper cell
2
T-47D cell
2
T-lymphocyte
2
Th1 cell
2
U-87 MG
2
U2OS
2
WERI-Rb-1
2
WI-38 cell
2
adipocyte
2
adult acute myeloid leukemia
2
aortic adventitial fibroblast
2
brain
2
bronchial epithelial cell
2
cardiac fibroblast
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
colon adenocarcinoma
2
diffuse large B-cell lymphoma
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endothelial cell of umbilical vein
2
erythroblast
2
erythroid progenitor cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
fibroblast
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
gamma-delta T cell
2
gastric cancer cell
2
glial cell
2
glioblastoma cell
2
hematopoietic multipotent progenitor cell
2
immortal neural cell line cell
2
leukemic stem cell
2
leukocyte
2
liver
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
mammary gland epithelial cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
2
meso-epithelial cell
2
metastatic melanoma
2
mononuclear cell of bone marrow
2
myotube
2
naive B cel
2
neuroblastoma cell line
2
osteosarcoma
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic cancer cell
2
pancreatic cell line
2
pancreatic delta cell
2
pancreatic stellate cell
2
peripheral blood-derived erythroblast
2
primordial germ cell
2
prostate derived cell line
2
prostate gland
2
renal connecting tubule
2
renal epithelial cell
2
renal vesicle
2
retinal pigment epithelial cell
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
smooth muscle cell
2
spinal cord
2
tracheal epithelial cell
1
143B
1
22Rv1
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
Life stage
adult
Date released
2
May, 2021
1
February, 2021
1
March, 2023
Software used
3
r
1
macs
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
adult
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR479UTT
released
Annotation file set
: Gene expression annotation of pancreatic mast from single-cell transcriptome analysis
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR342KCS
released
Annotation file set
: GSE118165 gene expression annotation of normal monocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267VPS
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated monocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR431VOC
released
Annotation file set
: Binding sites annotation for Blood Monocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP