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Schema
Citing CMDGA
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Annotation type
15
gene expression
4
eQTL
3
target gene predictions
2
accessible chromatin
1
meQTL
1
sQTL
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
2
ATAC-seq
1
DNA methylation profiling by array assay
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
1
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
B cell
3
monocyte
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
effector memory CD8-positive, alpha-beta T cell
2
extracellular matrix secreting cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
regulatory T cell
1
CD4-positive helper T cell
1
T cell
1
basal cell
1
ciliated cell
1
club cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
erythrocyte
1
immature natural killer cell
1
left renal cortex interstitium
1
macrophage
1
medulla oblongata
1
midbrain
1
myeloid dendritic cell
1
myofibroblast cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neuroendocrine cell
1
neutrophil
1
pericyte cell
1
plasma cell
1
plasmacytoid dendritic cell
1
right kidney
1
right renal cortex interstitium
1
skeletal muscle myoblast
1
type I pneumocyte
1
type II pneumocyte
Life stage
1
adult
Date released
2
May, 2020
1
May, 2021
Software used
macs
1
limix
1
minfi
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
effector memory CD8-positive, alpha-beta T cell
software_used.software.name!
macs
Showing 3 of 3 results
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Download
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157QFX
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal monocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR125CHQ
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated monocyte
Lab:
AMP-T2D consortium
Project:
AMP