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Citing CMDGA
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Annotation type
1
target gene predictions
0
histone modifications
Annotation Category
1
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
primary cell
1
cell line
Biosample term
55
HeLa-S3
40
H1-hESC
24
K562
22
stomach
21
heart
20
A549
20
neural progenitor cell
19
HFFc6
19
brain
17
adrenal gland
17
lung
17
placenta
17
small intestine
16
kidney
16
muscle of arm
15
large intestine
15
thymus
14
muscle of leg
13
left lung
13
muscle of back
12
liver
11
breast cancer cell
11
hematopoietic multipotent progenitor cell
11
right lung
10
pituitary stalk
10
right kidney
9
GM12878
9
gastric cancer cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
H9
8
HepG2
8
MCF-7
8
Rhabdomyosarcoma
8
adipose tissue
8
heart left ventricle
8
lymphocyte
8
neuroblastoma cell
8
psoas muscle
8
spleen
7
B-lymphoblastoid cell line
7
adipocyte
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
sigmoid colon
6
Chondroid Chordoma
6
dendritic cell
6
hESC cell
6
liposarcoma
6
neuroblastoma cell line
6
ovary
6
pancreas
6
squamous cell lung carcinoma
5
CyT49
5
T-cell acute lymphoblastic leukemia
5
body of pancreas
5
gastrocnemius medialis
5
heart right ventricle
5
melanoma cell
5
mesenchymal stem cell
5
muscle of trunk
5
osteosarcoma
5
thyroid gland
5
transverse colon
4
HUES8
4
Jurkat
4
aorta
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
iPSC derived cell line
4
layer of hippocampus
4
mesendoderm
4
prostate gland
4
retina
4
rhabdomyosarcoma cell
4
skeletal muscle tissue
4
testis
4
upper lobe of left lung
3
22Rv1
3
Ewing sarcoma
3
GM18507
3
GM19238
3
GM19239
3
GM19240
3
H7-hESC
3
HAP-1
3
HCT116
3
HT-29
3
IMR-90
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
Peyer's patch
3
SK-N-DZ
3
SK-N-SH
3
U937
3
breast epithelium
3
cardiac muscle cell
3
cardiomyocytes (cardiac muscle cell)
3
cerebellum
3
chorion membrane
3
colonic mucosa
3
coronary artery
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
endodermal cell
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
esophagus
3
glioblastoma cell
3
glioma cell
3
immortal human breast epithelial cell line cell
3
lymphoblast
3
lymphoblastoid cell line
3
neuronal stem cell
3
pancreatic ductal adenocarcinoma
3
substantia nigra
3
temporal lobe
3
tibial nerve
3
trophoblast
2
A673
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
B cell
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
Brodmann (1909) area 46
2
CMK
2
COLO205
2
Caco-2 cell
2
EndoC_BH1
2
GM06990
2
GM12864
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18505
2
GM19099
2
GM19193
2
GM23248
2
HCT-116 cell
2
HEK293
2
HK-2 cell
2
HL-60
2
HS-SY-2 cell
2
HuH-7
2
LHCN-M2
2
LNCAP
2
LNCaP clone FGC
2
MCF 10A cell
2
MDA-MB-231 cell
2
MG63
2
Mantle cell lymphoma
2
NCCIT cell
2
NT2-D1 cell
2
OCI-LY1
2
PC-3
2
Panc1
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Rh-4 cell
2
SK-MEL-5
2
SK-N-MC
2
SW480
2
T47D
2
THP-1
2
VCaP cell
2
WERI-Rb-1
2
acute myeloid leukemia
2
angular gyrus
2
ascending aorta
2
bipolar neuron
2
chronic lymphocytic leukemia
2
cingulate gyrus
2
colon adenocarcinoma
2
colon carcinoma
2
duodenal mucosa
2
endometriosis
2
epithelial ovarian cancer cell
2
esophageal carcinoma
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast
2
fibroblast cell line
2
fibroblast of cardiac tissue
2
frontal cortex
Date released
1
May, 2021
Software used
1
abc
Lab
1
Jesse Engreitz, Stanford University
Project
1
AMP
RFA
1
AMP
biosample_term_name!
GM12865
biosample_type!
primary cell
Showing 1 of 1 results
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Download
FileSet
DSR303OXY
released
Annotation file set
: enhancer-gene predicton of THP-1_monocyte-VanBortle2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP