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Schema
Citing CMDGA
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Annotation type
86
histone modifications
18
accessible chromatin
15
gene expression
4
eQTL
2
hQTL
1
binding sites
1
meQTL
1
sQTL
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
cell line
1
primary cell
Biosample term
21
stomach
20
heart
19
CD14-positive monocyte
17
adrenal gland
17
lung
17
small intestine
16
brain
16
muscle of arm
15
placenta
14
common myeloid progenitor, CD34-positive
14
kidney
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
13
thymus
11
right lung
10
hematopoietic multipotent progenitor cell
10
liver
10
pericyte cell
10
right kidney
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
adipose tissue
8
psoas muscle
8
spinal cord
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
endothelial cell
7
heart left ventricle
7
sigmoid colon
7
smooth muscle cell
7
trophoblast cell
6
adipocyte
6
dendritic cell
6
mononuclear cell
6
olfactory receptor cell
6
ovary
5
body of pancreas
5
gastrocnemius medialis
5
heart right ventricle
5
keratinocyte
5
muscle of trunk
5
natural killer cell
5
neural progenitor cell
5
pancreas
5
thyroid gland
5
transverse colon
4
CD8-positive, alpha-beta T cell
4
T cell
4
aorta
4
astrocyte
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
hepatocyte
4
mammary gland epithelial cell
4
mesenchymal stem cell
4
pancreatic delta cell
4
regulatory T cell
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
breast epithelium
3
caudate nucleus
3
chorion membrane
3
colon epithelial cell
3
coronary artery
3
epithelial cell of prostate
3
esophagus
3
layer of hippocampus
3
luminal epithelial cell of mammary gland
3
mesendoderm
3
naive T cell
3
neurosphere
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
retina
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
skin fibroblast
3
testis
3
tibial nerve
3
trophoblast
3
type B pancreatic cell
3
upper lobe of left lung
Ammon's horn
2
Brodmann (1909) area 46
2
CD4-positive helper T cell
2
T-cell
2
angular gyrus
2
ascending aorta
2
bipolar neuron
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cardiac muscle cell
2
cardiomyocytes (cardiac muscle cell)
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
frontal cortex
2
gabaergic neuron
2
glutamatergic neuron
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
macrophage
2
memory B cell
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
osteoblast
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right cardiac atrium
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
type II pneumocyte
2
urinary bladder
2
uterus
2
vagina
1
B cell, CD19-positive
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, alpha-beta T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alveolar macrophage
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
beige adipocyte
1
bladder (urinary bladder)
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
cardiac mesoderm primordium
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle
1
cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
dorsolateral prefrontal cortex
1
eccrine cell
1
ectodermal cell
1
embryonic facial prominence
1
embryonic stem cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
Date released
1
January, 2021
Software used
chicago
1
cicero
Lab
1
Kyle Gaulton, UCSD
Project
1
T1D
RFA
1
T1D
biosample_term_name!
Ammon's horn
biosample_type!
cell line
software_used.software.name!
chicago
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR158NKH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D