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Annotation type
1
eQTL
1
sQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
89
ChIP-seq
16
ATAC-seq
3
DNase-seq
2
RNA-seq
2
snATAC-seq
1
DNA methylation profiling by array assay
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
11
islet of Langerhans
7
induced pluripotent stem cell
4
hepatocyte
4
subcutaneous adipose tissue
3
liver
2
EndoC_BH1
2
adipose tissue
2
blood
2
cartilage tissue
2
monocyte
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
kidney
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
mesangial cell
1
mesenchymal stem cell of adipose
1
nephron tubule
1
omental fat pad
1
pancreatic alpha cell
1
pericardium fibroblast
1
progenitor cell
1
renal cortical epithelial cell
1
renal glomerulus
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
skeletal muscle tissue
1
smooth muscle cell of the coronary artery
1
synovial joint
Life stage
2
adult
Date released
2
May, 2021
Software used
qTLtools
2
limix
1
sqtlseeker
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
files.file_type!
tsv
software_used.software.name!
qTLtools
Showing 2 of 2 results
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Download
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP