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Schema
Citing CMDGA
Clear Filters
Annotation type
3
eQTL
1
accessible chromatin
1
target gene predictions
Annotation Category
3
Genetic variant effects
1
Target gene links
1
cis-regulatory elements
Annotation type Category
3
RNA-seq
2
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
3
GRCh38
2
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
9
macrophage
6
lymphoblastoid cell line
5
monocyte
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
4
regulatory T cell
3
activated CD4-positive, alpha-beta T cell
3
activated CD8-positive, alpha-beta T cell
3
blood cell
3
islet of Langerhans
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
skin of body
2
CD8-positive, alpha-beta T cell
2
T cell
2
brain
2
conventional dendritic cell
2
endothelial cell
2
fibroblast
2
iPSC derived cell line
2
megakaryocyte
2
memory B cell
2
muscle
2
naive B cell
2
natural killer cell mediated cytotoxicity
2
non-classical monocyte
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
putamen
2
stellate neuron
2
substantia nigra
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
adipose tissue
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
astrocyte
1
breast
1
caudate nucleus
1
cell
1
cerebellar hemisphere
1
cerebellum
1
colon sigmoid
1
coronary artery
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fat cell
1
frontal cortex
1
heart left ventricle
1
helper T cell
1
hippocampal neuron
1
hypothalamus
1
layer of hippocampus
1
liver
1
lower motor neuron
1
lung
1
microglial cell
1
minor salivary gland
1
naive B cel
1
neutrophil
1
nucleus accumbens
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
prostate gland
1
right atrium auricular region
1
sensory neuron
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
subcutaneous adipose tissue
1
testis
1
thyroid gland
1
tibial artery
1
tibial nerve
1
transverse colon
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Date released
118
May, 2021
3
February, 2021
3
January, 2022
3
May, 2020
2
January, 2021
2
June, 2020
Software used
3
qTLtools
1
cicero
1
macs
Lab
3
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
3
AMP
2
T1D
RFA
3
AMP
2
T1D
Showing 5 of 5 results
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Download
FileSet
DSR338LAI
released
Annotation file set
: monocyte naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR085HYL
released
Annotation file set
: monocyte CD16 naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR583OYR
released
Annotation file set
: monocyte eQTL of studay BLUEPRINT from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR158NKH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR234HXR
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D