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Citing CMDGA
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Annotation type
3
eQTL
1
target gene predictions
Annotation Category
3
Genetic variant effects
1
Target gene links
Annotation type Category
3
RNA-seq
1
pCHi-C
Available data
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
10
islet of Langerhans
8
macrophage
6
lymphoblastoid cell line
4
monocyte
3
blood cell
3
skin of body
2
CD4-positive, alpha-beta T cell
2
T cell
2
activated CD4-positive, alpha-beta T cell
2
brain
2
fibroblast
2
iPSC derived cell line
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
neutrophil
2
putamen
2
regulatory T cell
2
substantia nigra
1
B cell
1
CD8-positive, alpha-beta T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
HepG2
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
breast
1
cardiomyocytes (cardiac muscle cell)
1
caudate nucleus
1
cerebellar hemisphere
1
cerebellum
1
colon sigmoid
1
coronary artery
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
endothelial cell
1
erythroblast
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
frontal cortex
1
heart left ventricle
1
helper T cell
1
hypothalamus
1
inflammatory macrophage
1
layer of hippocampus
1
liver
1
lung
1
lymphocyte of B lineage (iPSC)
1
megakaryocyte
1
mesenchymal stem cell
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive B cell
1
natural killer cell
1
nucleus accumbens
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
prostate gland
1
retina
1
right atrium auricular region
1
sensory neuron
1
skeletal muscle tissue
1
small intestine
1
smooth muscle cell
1
spinal cord
1
spleen
1
stomach
1
subcutaneous adipose tissue
1
testis
1
thymus
1
thyroid gland
1
tibial artery
1
tibial nerve
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
undifferentiated ESC (H9 cell line)
1
uterus
1
vagina
1
visceral abdominal adipose tissue
1
white adipose cell
Date released
3
January, 2022
1
May, 2020
Software used
105
macs
15
r
5
limix
3
qTLtools
1
abc
1
chicago
1
cicero
1
minfi
1
sqtlseeker
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR338LAI
released
Annotation file set
: monocyte naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR085HYL
released
Annotation file set
: monocyte CD16 naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR583OYR
released
Annotation file set
: monocyte eQTL of studay BLUEPRINT from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR499JJX
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of monocyte
Lab:
AMP-T2D consortium
Project:
AMP