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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
gene expression
4
chromatin state
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
bed bed3+
4
bed bed9
File set status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
21
heart
20
brain
20
stomach
18
A549
17
islet of Langerhans
17
lung
16
kidney
16
liver
16
muscle of arm
16
small intestine
15
adrenal gland
15
muscle of leg
15
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right kidney
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
9
CD4-positive, alpha-beta memory T cell
9
adipose tissue
9
caudate nucleus
9
heart left ventricle
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
subcutaneous adipose tissue
9
tibial nerve
8
B cell
8
body of pancreas
8
coronary artery
8
putamen
8
spinal cord
8
substantia nigra
8
tibial artery
7
CD8-positive, alpha-beta memory T cell
7
ascending aorta
7
cerebellum
7
frontal cortex
7
induced pluripotent stem cell
7
macrophage
7
mature neutrophil
7
omental fat pad
7
right atrium auricular region
7
spleen
6
K562
6
T cell
6
embryonic stem cell
6
lymphoblastoid cell line
6
monocyte
6
mononuclear cell
6
neutrophil
5
Ammon's horn
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
amygdala
5
anterior cingulate cortex
5
endothelial cell of umbilical vein
5
heart right ventricle
5
hypothalamus
5
neural progenitor cell
5
nucleus accumbens
5
ovary
5
regulatory T cell
5
right lobe of liver
5
sigmoid colon
5
skeletal muscle tissue
5
thyroid gland
5
transverse colon
5
trophoblast cell
4
C1 segment of cervical spinal cord
4
CD14-positive monocyte
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
cerebellum (Hemisphere)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
foreskin keratinocyte
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
layer of hippocampus
4
left ventricle myocardium
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
natural killer cell
4
pancreatic acinar cell
4
pancreatic ductal cell
4
psoas muscle
4
retina
4
skin of body
4
temporal lobe
4
testis
3
CD4-positive, alpha-beta T cell
3
EndoC_BH1
3
HeLa-S3
3
Peyer's patch
3
blood cell
3
cartilage tissue
3
chorion membrane
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
left renal cortex interstitium
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive T cell
3
neurosphere
3
pancreas
3
pancreatic MUC5B+ductal cell
3
pancreatic alpha cell
3
pancreatic alpha+beta cell
3
pancreatic beta cell
3
pancreatic cycling alpha cell
3
pancreatic delta cell
3
pancreatic endothelial cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
pancreatic stellate cell
3
prostate gland
3
right cardiac atrium
3
right renal cortex interstitium
3
skeletal muscle myoblast
3
thoracic aorta
3
upper lobe of left lung
3
vagina
2
22Rv1
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
Brodmann (1909) area 46
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
KARPAS-422 cell
2
LNCaP clone FGC
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
NAMALWA cell
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
SK-N-DZ
2
SK-N-SH
2
T Cell
2
T47D
Life stage
4
embryonic
Date released
4
September, 2022
1
August, 2021
Software used
4
chromhmm
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
gene expression
files.file_type!
bed bed3+
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR048DMI
released
Annotation file set
: Chromatin states for BSS01372 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR866LQQ
released
Annotation file set
: Chromatin states for BSS01371 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR285WEC
released
Annotation file set
: Chromatin states for BSS01370 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR377DHA
released
Annotation file set
: Chromatin states for BSS00272 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR680UFD
released
Annotation file set
: Histone modifications annotation of H3K27me3 ChIPseq of neural progenitor cells differentiated into neural lineage until appropriate time points (6 hours).
Lab:
AMP-T2D consortium
Project:
AMP