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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
7
gene expression
5
candidate regulatory elements
5
target gene predictions
4
binding sites
3
histone modifications
0
accessible chromatin
Annotation Category
5
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
pCHi-C
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
15
hg19
GRCh38
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
25
retina
24
stomach
22
heart
20
A549
20
pigmented layer of retina
19
CD14-positive monocyte
18
adrenal gland
18
small intestine
17
brain
17
lung
16
muscle of arm
16
placenta
15
B cell
15
kidney
15
large intestine
15
muscle of leg
15
thymus
14
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of back
12
liver
12
right lung
11
adipocyte
11
hematopoietic multipotent progenitor cell
10
adipose tissue
10
pituitary stalk
10
renal pelvis
10
right kidney
10
spinal cord
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
natural killer cell
9
psoas muscle
9
regulatory T cell
9
renal cortex interstitium
9
spleen
8
CD8-positive, alpha-beta T cell
8
EndoC_BH1
8
K562
8
monocyte
8
retinal pigment epithelial cell
8
sigmoid colon
8
trophoblast cell
7
CD8-positive, alpha-beta memory T cell
7
MCF-7
7
embryonic stem cell
7
heart left ventricle
7
mesenchymal stem cell
7
ovary
7
pancreas
7
pancreatic alpha cell
7
pancreatic beta cell
7
pancreatic delta cell
6
SGBS preadipocytes
6
T cell
6
T-helper 1 cell
6
dendritic cell
6
gastrocnemius medialis
6
macrophage
6
mononuclear cell
6
thyroid gland
6
transverse colon
5
T-helper 17 cell
5
T-helper 2 cell
5
body of pancreas
5
chondrocyte
5
endothelial cell
5
endothelial cell of umbilical vein
5
fibroblast of cardiac tissue
5
foreskin keratinocyte
5
heart right ventricle
5
muscle of trunk
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
neural progenitor cell
5
pancreatic ductal cell
5
skeletal muscle myoblast
4
HeLa-S3
4
HepG2
4
Peyer's patch
4
aorta
4
breast epithelium
4
caudate nucleus
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
epithelial cell of prostate
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
glutamatergic neuron
4
hepatocyte
4
mammary gland epithelial cell
4
memory B cell
4
mesendoderm
4
osteoblast
4
pancreatic acinar cell
4
skin fibroblast
4
testis
4
tibial nerve
4
trophoblast
4
upper lobe of left lung
3
Ammon's horn
3
CD4-positive helper T cell
3
GM12878
3
H1-hESC
3
H7-hESC
3
HAP-1
3
HT-29
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
U937
3
activated CD4-positive, alpha-beta T cell
3
bipolar neuron
3
bronchial epithelial cell
3
cardiomyocytes (cardiac muscle cell)
3
coronary artery
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
frontal cortex
3
glomerular visceral epithelial cell
3
immortal human breast epithelial cell line cell
3
islet of Langerhans
3
keratinocyte
3
kidney tubule cell
3
layer of hippocampus
3
limb
3
megakaryocyte
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neurosphere
3
neutrophil
3
pancreatic polypeptide-secreting cell
3
pancreatic stellate cell
3
plasmacytoid dendritic cell
3
prostate gland
3
right atrium auricular region
3
skeletal muscle satellite cell
3
skeletal muscle tissue
3
smooth muscle cell
3
tibial artery
3
tongue
3
urinary bladder
3
uterus
2
22Rv1
2
A172
2
A673
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive, alpha-beta T cell
2
CMK
2
Caco-2 cell
2
Caki2
2
Daoy
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM18507
2
GM19240
2
GM23248
2
H4
2
H9
2
HCT-116 cell
2
HEK293
2
HL-60
2
HUES6
2
HuH-7
2
KBM-7
2
L1-S8
2
L1-S8R
2
LHCN-M2
2
LNCAP
2
LNCaP clone FGC
2
M059J
Life stage
4
embryonic
Date released
4
September, 2022
1
March, 2020
Software used
4
r
1
nospecificsoft_customcode
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
assembly!
GRCh38
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR098BJF
released
Annotation file set
: Target gene predictions for BSS01372 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR444LZF
released
Annotation file set
: Target gene predictions for BSS01371 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR166MST
released
Annotation file set
: Target gene predictions for BSS01370 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR989NQF
released
Annotation file set
: Target gene predictions for BSS00272 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR727XIO
released
Annotation file set
: A target gene prediction annotation in Human Neural Prgenitor Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP