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Schema
Citing CMDGA
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Annotation type
7
accessible chromatin
3
differential activity
3
gene expression
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
2
snATAC-seq
Available data
3
bed bed3+
bigBed narrowPeak
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
7
endothelial cell
5
keratinocyte
4
colon epithelial cell
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
hepatocyte
4
mammary gland epithelial cell
3
breast epithelium
3
epithelial cell of prostate
3
luminal epithelial cell of mammary gland
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic delta cell
3
pancreatic ductal cell
3
type B pancreatic cell
2
bronchial epithelial cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
esophagus squamous epithelium
2
kidney tubule cell
2
myoepithelial cell of mammary gland
2
pancreatic alpha cell
2
pancreatic beta cell
2
type II pneumocyte
1
EndoC_BH1
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
choroid plexus epithelial cell
1
club cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
foveolar cell of stomach
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granular cell of epidermis
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
mesothelial cell
1
myoepithelial cell
1
non keratinizing barrier epithelial cell
1
non-pigmented ciliary epithelial cell
1
pancreatic polypeptide-secreting cell
1
paneth cell
1
parietal cell
1
peptic cell
1
pulmonary artery endothelial cell
1
renal cortical epithelial cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
Organ
2
epithelium
2
pancreas
Date released
2
January, 2021
Software used
2
cicero
Lab
2
Kyle Gaulton, UCSD
Project
2
T1D
RFA
2
T1D
files.file_type!
bigBed narrowPeak
Showing 2 of 2 results
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Download
FileSet
DSR166ECC
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of INSlow_beta
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR131NAF
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of INShigh_beta
Lab:
Kyle Gaulton, UCSD
Project:
T1D