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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
2
CD8-positive, alpha-beta T cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
conventional dendritic cell
2
endothelial cell
2
macrophage
2
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
natural killer cell mediated cytotoxicity
2
non-classical monocyte
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
regulatory T cell
2
stellate neuron
Organ
4
epithelium
4
pancreas
Date released
4
January, 2021
4
March, 2023
2
February, 2021
2
November, 2021
1
August, 2018
1
February, 2024
1
May, 2021
1
October, 2019
1
September, 2022
Software used
2
cicero
2
macs
Lab
4
Kyle Gaulton, UCSD
Project
4
T1D
RFA
4
T1D
biosample_term_name!
right lung
Showing 4 of 4 results
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Download
FileSet
DSR746SVT
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of GCGlow_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR998IGH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of GCGhigh_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR018TPI
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of GCGlow_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR185GHH
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of GCGhigh_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D