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Schema
Citing CMDGA
Clear Filters
Annotation type
50
candidate regulatory elements
26
target gene predictions
22
chromatin state
6
eQTL
4
accessible chromatin
3
gene expression
2
histone modifications
1
hQTL
1
meQTL
1
other
1
sQTL
Annotation Category
6
Genetic variant effects
Annotation type Category
6
RNA-seq
1
Expression arrays
File set status
6
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
6
Homo sapiens
Biosample type
4
tissue
2
primary cell
Biosample term
13
islet of Langerhans
7
liver
7
macrophage
6
lymphoblastoid cell line
6
subcutaneous adipose tissue
4
adipose tissue
4
monocyte
3
blood cell
3
putamen
3
skin of body
3
substantia nigra
2
T cell
2
amygdala
2
anterior cingulate cortex
2
articular chondrocyte
2
blood
2
brain
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
coronary artery
2
fibroblast
2
frontal cortex
2
hypothalamus
2
iPSC derived cell line
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
regulatory T cell
2
right atrium auricular region
2
skeletal muscle tissue
2
tibial artery
2
tibial nerve
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adrenal gland
1
ascending aorta
1
body of pancreas
1
breast
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
gastrocnemius medialis(Muscle - Skeletal)
1
heart left ventricle
1
helper T cell
1
kidney
1
layer of hippocampus
1
left ventricle myocardium
1
lung
1
mesenchymal stem cell
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
nephron tubule
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
progenitor cell
1
prostate gland
1
renal glomerulus
1
retina
1
right lobe of liver
1
sensory neuron
1
small intestine
1
smooth muscle cell
1
spinal cord
1
spleen
1
stomach
1
synovial joint
1
testis
1
thyroid gland
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
2
musculature of body
1
stomach
Life stage
3
adult
1
unknown
Date released
2
August, 2021
2
January, 2022
1
February, 2021
1
May, 2021
Software used
3
qTLtools
1
fastqtl
1
limix
1
matrix-eQTL
1
peer
Lab
5
AMP-T2D consortium
1
ITG
Project
5
AMP
1
ITG
RFA
5
AMP
1
ITG
Showing 6 of 6 results
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FileSet
DSR770XRL
released
Annotation file set
: CD4 T-cell naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR542EVP
released
Annotation file set
: stomach eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR817XBR
released
Annotation file set
: eQTL annotation of skeletal muscle tissue from PMID:27353450
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR474VCE
released
Annotation file set
: eQTL of synovial tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR595CTR
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259PWV
released
Annotation file set
: Genetic regulators (quantitative trait loci; QTLs) of expression (eQTLs) of human skeletal muscle from FUSION study
Lab:
AMP-T2D consortium
Project:
AMP