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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
21
candidate regulatory elements
19
chromatin state
3
accessible chromatin
2
target gene predictions
1
eQTL
1
histone modifications
Annotation Category
2
Target gene links
1
Genetic variant effects
Annotation type Category
2
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
1
RNA-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
52
HeLa-S3
38
H1-hESC
19
HFFc6
17
K562
15
CD14-positive monocyte
12
islet of Langerhans
11
macrophage
10
pituitary stalk
9
liver
9
pericyte cell
8
endothelial cell
7
GM12878
7
H9
7
monocyte
7
smooth muscle cell
6
adipose tissue
6
dendritic cell
6
fibroblast
6
iPSC derived cell line
6
lymphoblastoid cell line
6
lymphocyte
6
olfactory receptor cell
6
subcutaneous adipose tissue
5
CD8-positive, alpha-beta T cell
4
CyT49
4
HUES8
4
adipocyte
4
adrenal gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
pancreas
4
pancreatic delta cell
4
psoas muscle
3
CD4-positive, alpha-beta T cell
3
activated CD4-positive, alpha-beta T cell
3
astrocyte
3
blood cell
3
cardiomyocytes (cardiac muscle cell)
3
colon epithelial cell
3
coronary artery
3
heart left ventricle
3
keratinocyte
3
mesenchymal stem cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
neutrophil
3
ovary
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
putamen
3
regulatory T cell
3
skin of body
3
small intestine
3
spleen
3
stomach
3
substantia nigra
3
thymus
3
type B pancreatic cell
2
Ammon's horn
2
B cell
2
BJAB cell
2
CD4-positive helper T cell
2
HCT116
2
HepG2
2
Jurkat
2
MCF 10A cell
2
T cell
2
T-cell
2
THP-1
2
U937
2
activated CD8-positive, alpha-beta T cell
2
amygdala
2
anterior cingulate cortex
2
aorta
2
articular chondrocyte
2
blood
2
blood vessel smooth muscle cell
2
body of pancreas
2
brain
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
cortical cell of adrenal gland
2
dorsolateral prefrontal cortex
2
endothelial cell of umbilical vein
2
enteric smooth muscle cell
2
erythroblast
2
esophagus
2
fat cell
2
frontal cortex
2
gabaergic neuron
2
glutamatergic neuron
2
heart right ventricle
2
hepatocyte
2
hypothalamus
2
luminal epithelial cell of mammary gland
2
lung
2
lymphocyte of B lineage (iPSC)
2
megakaryocyte
2
memory B cell
2
mesendoderm
2
microglial cell
2
muscle
2
naive B cell
2
nucleus accumbens
2
omental fat pad
2
placenta
2
right atrium auricular region
2
sigmoid colon
2
skeletal muscle tissue
2
smooth muscle cell of the esophagus
2
spinal cord
2
thyroid gland
2
tibial artery
2
tibial nerve
2
transverse colon
2
trophoblast cell
2
type I muscle cell
2
type II muscle cell
2
type II pneumocyte
2
uterus
1
A549
1
A673
1
B cell, CD19-positive
1
B-lymphoblastoid cell line
1
C1 segment of cervical spinal cord
1
CD56-positive, CD161-positive immature natural killer cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
H7-hESC
1
HAP-1
1
HCT-116 cell
1
HT-29
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
KARPAS-422 cell
1
LNCAP
1
Leydig cell
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
ascending aorta
1
basal cell
1
basal cell of epidermis
1
beige adipocyte
1
bipolar neuron
1
bladder (urinary bladder)
1
breast
1
breast epithelium
1
cardiac endothelial cell
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle
1
cell
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
ciliated cell
1
club cell
1
colon goblet cell
1
colon sigmoid
1
common myeloid progenitor, CD34-positive
1
conventional dendritic cell
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
eccrine cell
1
embryonic stem cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
Organ
3
stomach
Date released
2
May, 2021
1
January, 2022
Software used
r
2
abc
1
qTLtools
Lab
2
Jesse Engreitz, Stanford University
1
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
software_used.software.name!
r
Showing 3 of 3 results
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Download
FileSet
DSR542EVP
released
Annotation file set
: stomach eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR408DBU
released
Annotation file set
: enhancer-gene predicton of stomach_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR821UNZ
released
Annotation file set
: enhancer-gene predicton of stomach-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP