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Schema
Citing CMDGA
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Annotation type
19
chromatin state
1
eQTL
1
gene expression
1
histone modifications
0
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
DNase-seq
20
ChIP-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
88
monocyte
51
HeLa-S3
38
H1-hESC
33
CD8-positive, alpha-beta T cell
19
HFFc6
17
K562
17
neural progenitor cell
11
breast cancer cell
9
gastric cancer cell
9
pericyte cell
8
Rhabdomyosarcoma
8
endothelial cell
8
neuroblastoma cell
7
B-lymphoblastoid cell line
7
GM12878
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
lymphocyte
6
Chondroid Chordoma
6
H9
6
HepG2
6
fibroblast
6
hESC cell
6
liposarcoma
6
neuroblastoma cell line
6
olfactory receptor cell
6
smooth muscle cell
6
squamous cell lung carcinoma
5
CyT49
5
T-cell acute lymphoblastic leukemia
5
hepatocyte
5
keratinocyte
5
melanoma cell
5
osteosarcoma
4
HUES8
4
iPSC derived cell line
4
liver
4
macrophage
4
pancreatic delta cell
4
pancreatic ductal cell
4
rhabdomyosarcoma cell
3
B cell
3
CD4-positive, alpha-beta T cell
3
Ewing sarcoma
3
acute myeloid leukemia
3
astrocyte
3
brain
3
cardiomyocytes (cardiac muscle cell)
3
colon epithelial cell
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
esophageal squamous cell carcinoma
3
fibroblast of cardiac tissue
3
glioblastoma cell
3
glioma cell
3
heart left ventricle
3
lymphoblast
3
lymphoblastoid cell line
3
mammary epithelial cell
3
natural killer cell
3
neuronal stem cell
3
pancreas
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal adenocarcinoma
3
psoas muscle
3
thymus
2
B-lymphocyte
2
COLO205
2
EndoC_BH1
2
GM18505
2
GM18507
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
HCT116
2
HS-SY-2 cell
2
Jurkat
2
MCF-7
2
Mantle cell lymphoma
2
RS4-11 cell
2
Rh-4 cell
2
Th1 cell
2
activated CD4-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
aorta
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cardiac muscle cell
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
cortical cell of adrenal gland
2
endometriosis
2
enteric smooth muscle cell
2
epithelial ovarian cancer cell
2
erythroid progenitor cell
2
esophageal carcinoma
2
fibroblast cell line
2
foreskin fibroblast
2
gabaergic neuron
2
glioblastoma multiforme cancer stem cell
2
glutamatergic neuron
2
heart
2
heart right ventricle
2
hematopoietic cell
2
hepatic stellate cell
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
islet of Langerhans
2
kidney
2
leukemic stem cell
2
luminal epithelial cell of mammary gland
2
lymphocyte of B lineage (iPSC)
2
mammary gland epithelial cell
2
mantle cell lymphoma cell
2
mast cell
2
medulloblastoma cell line
2
megakaryocyte
2
memory B cell
2
mesenchymal stem cell
2
mesendoderm
2
metastatic melanoma
2
multiple myeloma cell line
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
osteoblast
2
pancreatic A cell
2
pancreatic cell line
2
placenta
2
plasma cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
prostate gland
2
regulatory T cell
2
skin fibroblast
2
smooth muscle cell of the esophagus
2
synovial sarcoma cell
2
tracheal epithelial cell
2
triple-negative breast cancer
2
type B pancreatic cell
2
type II pneumocyte
2
umbilical cord mesenchymal stem cell line cell
2
urinary bladder cancer cell
1
143B
1
22Rv1
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG08470 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
Adipose stromal cell
1
Ammon's horn
1
AsPC-1 cell
1
B-cell lymphoma cell
1
BCBL-1 cell
1
BE(2)-C
1
BEAS-2B cell
1
BG03
1
BGC-823 cell
1
BHY cell
1
BICR 31
1
BJ cell
1
BT-474 cell
1
BT-549 cell
1
Barrett's epithelial cell line
1
Barrett's esophagus
1
Brodmann (1909) area 9
1
BxPC-3 cell
1
C666-1 cell
1
CA46 cell
1
CAL-33 cell
1
CAL-51 cell
1
CCRF-CEM cell
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive helper T cell
1
CD8-Positive T-Lymphocytes
1
CFPAC-1 cell
1
CHL-1 cell
Organ
1
stomach
Date released
1
February, 2021
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
DNase-seq
Showing 1 of 1 results
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Download
FileSet
DSR497XLY
released
Annotation file set
: Histone modifications annotation for Digestive tract Gastric_primary_sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP